Pre_GI: BLASTP Hits

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Query: NC_012125:1360593:1362528 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1362528, End: 1363946, Length: 1419

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:401154:4011544011544025721419Salmonella enterica subsp. enterica serovar Choleraesuis strDNA stabilization protein0976
CU928145:2655989:2679976267997626813941419Escherichia coli 55989 chromosome, complete genomePackaged DNA stabilization protein from phage0962
NC_011748:2655989:2679976267997626813941419Escherichia coli 55989, complete genomePackaged DNA stabilization protein from phage0962
NC_017328:335160:3351603351603365781419Shigella flexneri 2002017 chromosome, complete genomeDNA stabilization protein0959
NC_011742:2489000:2507968250796825093861419Escherichia coli S88 chromosome, complete genomePackaged DNA stabilization protein from phage0957
NC_008563:2565876:2584871258487125862891419Escherichia coli APEC O1, complete genomeputative DNA stabilization protein0957
NC_007946:2593500:2611645261164526130631419Escherichia coli UTI89, complete genomeDNA stabilization protein0957
CP002516:1475521:1475521147552114769391419Escherichia coli KO11, complete genomeputative packaged DNA stabilization protein0954
CP002185:2608000:2628918262891826303361419Escherichia coli W, complete genomeputative DNA stabilization protein0954
NC_016902:1475521:1475521147552114769391419Escherichia coli KO11FL chromosome, complete genomeputative packaged DNA stabilization protein0954
NC_011740:2072173:2090148209014820915661419Escherichia fergusonii ATCC 35469, complete genomePackaged DNA stabilization protein from phage0953
NC_011083:403022:4030224030224044401419Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,packaged DNA stabilization protein gp100935
NC_013361:3254000:3275320327532032767141395Escherichia coli O26:H11 str. 11368 chromosome, complete genomehead DNA stabilization protein0934
NC_016860:397138:3975983975983990161419Salmonella enterica subsp. enterica serovar Typhimurium strputative DNA stabilization protein0927
NC_011205:645591:6455916455916470091419Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853gp100924
NC_010067:2529750:2569848256984825712421395Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0897
NC_013364:2612822:2629196262919626306141419Escherichia coli O111:H- str. 11128, complete genomeputative head DNA stabilization protein0897
NC_020418:3102460:3119270311927031206881419Morganella morganii subsp. morganii KT, complete genomehypothetical protein0720