Pre_GI: BLASTP Hits

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Query: NC_011985:3869998:3869998 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 3869998, End: 3870930, Length: 933

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009254:365812:3682773682773694401164Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein6e-1788.2
NC_010676:2793237:2792080279208027932401161Burkholderia phytofirmans PsJN chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-1583.6
NC_014532:2664139:2708237270823727092411005Halomonas elongata DSM 2581, complete genomeTrbL/VirB6 plasmid conjugal transfer protein2e-1583.2
NC_008543:127675:1519671519671531181152Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein4e-1479.3
NC_008061:2106848:2116651211665121178021152Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein4e-1479.3
NC_015458:2338437:2352774235277423538561083Pusillimonas sp. T7-7 chromosome, complete genomeTraH protein2e-1377
NC_011001:372185:3834953834953846461152Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB64e-1375.5
NC_010170:3908500:392072539207253921675951Bordetella petrii, complete genometype IV secretion system protein VirB66e-1375.1
NC_010515:1124298:1134103113410311352541152Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein1e-1274.3
NC_013722:3117442:3126963312696331280571095Xanthomonas albilineans, complete genomeputative conjugal transfer protein3e-1272.8
NC_010524:933191:9331919331919342281038Leptothrix cholodnii SP-6, complete genomeTrbL/VirB6 plasmid conjugal transfer protein6e-1271.6
NC_008260:2340824:235755323575532358485933Alcanivorax borkumensis SK2, complete genomehypothetical protein2e-0963.5
NC_019973:5694620:570636057063605707247888Mesorhizobium australicum WSM2073, complete genometype IV secretory pathway, VirB6 component3e-0859.3
NC_014923:5765660:577740057774005778287888Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeTrbL/VirB6 plasmid conjugal transfer protein3e-0859.3
NC_015675:6276357:633207163320716332958888Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTrbL/VirB6 plasmid conjugal transfer protein3e-0859.3
NC_016626:1699500:174454317445431745409867Burkholderia sp. YI23 plasmid byi_1p, complete sequenceType IV secretory pathway, VirB6 protein4e-0755.8
NC_014914:127873:1423721423721434961125Taylorella equigenitalis MCE9 chromosome, complete genomeInner membrane protein of type IV secretion of T-DNA complex, VirB64e-0755.8
NC_007354:756500:7688997688997732334335Ehrlichia canis str. Jake, complete genomeTrbL/VirB6 plasmid conjugal transfer protein5e-0755.5
NC_008060:2913671:293155729315572932468912Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein1e-0654.3
NC_008542:483761:4941774941774953161140Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein1e-0654.3
NC_015379:6226661:6236400623640062374521053Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative type IV secretion system protein virB61e-0653.9
NC_006831:849500:8634728634728682474776Ehrlichia ruminantium str. Gardel, complete genomehypothetical protein2e-0653.5
NC_016814:18000:3849038490395181029Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceUncharacterized lipoprotein RF_0093 Flags: Precursor2e-0653.5
NC_006832:853500:8679208679208726294710Ehrlichia ruminantium str. Welgevonden, complete genomehypothetical protein3e-0653.1
NC_005295:873500:8883588883588929474590Ehrlichia ruminantium str. Welgevonden, complete genomeputative type IV secretion system protein3e-0653.1
NC_006833:1011537:1051828105182810550673240Wolbachia endosymbiont strain TRS of Brugia malayi, completeType IV secretory pathway, VirB6 components4e-0652.4
NC_016929:109500:1267401267401301923453Rickettsia canadensis str. CA410 chromosome, complete genomehypothetical protein5e-0652