Pre_GI: BLASTP Hits

Some Help

Query: NC_011601:4036590:4045794 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4045794, End: 4046567, Length: 774

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012759:3675396:368569436856943686545852Escherichia coli BW2952 chromosome, complete genomelipopolysaccharide core biosynthesis protein2e-139494
AC_000091:3827856:384021938402193841070852Escherichia coli W3110 DNA, complete genomelipopolysaccharide core biosynthesis protein2e-139494
NC_000913:3786124:379736837973683798219852Escherichia coli K12, complete genomelipopolysaccharide core biosynthesis protein2e-139494
NC_010473:3883701:389494538949453895796852Escherichia coli str. K-12 substr. DH10B, complete genomelipopolysaccharide core biosynthesis protein2e-139494
NC_011740:4007000:401490840149084015717810Escherichia fergusonii ATCC 35469, complete genomelipopolysaccharide core biosynthesis protein7e-138489
NC_013716:4408201:442069744206974421506810Citrobacter rodentium ICC168, complete genomelipopolysaccharide core biosynthesis protein RfaZ2e-120431
NC_020063:97436:106635106635107444810Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein5e-120430
NC_015761:3611993:361990836199083620717810Salmonella bongori NCTC 12419, complete genomelipopolysaccharide core biosynthesis protein RfaZ2e-110398
NC_011080:3875320:388324438832443884053810Salmonella enterica subsp. enterica serovar Newport str. SL254,lipopolysaccharide core biosynthesis protein RfaZ5e-110397
NC_011149:3822000:383017538301753830984810Salmonella enterica subsp. enterica serovar Agona str. SL483,lipopolysaccharide core biosynthesis protein RfaZ5e-110397
NC_011094:3778000:378616137861613786970810Salmonella enterica subsp. enterica serovar Schwarzengrund strlipopolysaccharide core biosynthesis protein5e-110397
NC_011294:3782655:379190837919083792717810Salmonella enterica subsp. enterica serovar Enteritidis strlipopolysaccharide core biosynthesis protein5e-110397
NC_011083:3915500:392381739238173924626810Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipopolysaccharide core biosynthesis protein RfaZ1e-109396
NC_003197:3902500:391080739108073911616810Salmonella typhimurium LT2, complete genomelipopolysaccharide core biosynthetic protein1e-109396
NC_016810:3923988:393212139321213932930810Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein RfaZ1e-109396
NC_016856:3916500:392449939244993925308810Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Slipopolysaccharide core biosynthesis protein1e-109396
NC_016857:3924000:393212239321223932931810Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lipopolysaccharide core biosynthesis protein1e-109396
NC_016860:3925500:393370339337033934512810Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein1e-109396
NC_016863:3864000:387210638721063872915810Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1lipopolysaccharide core biosynthesis protein1e-109396
NC_017046:3923000:393094839309483931757810Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipopolysaccharide core biosynthesis protein RfaZ1e-109396
NC_010102:3851500:385975438597543860563810Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-110396
NC_006905:3845000:385310838531083853917810Salmonella enterica subsp. enterica serovar Choleraesuis strlipopolysaccharide core biosynthesis7e-110396
NC_012125:3840000:384796338479633848772810Salmonella enterica subsp. enterica serovar Paratyphi C strainlipopolysaccharide core biosynthesis protein7e-110396
NC_016831:3875134:388686638868663887675810Salmonella enterica subsp. enterica serovar Gallinarum/pullorumlipopolysaccharide core biosynthesis protein RfaZ3e-109394
NC_003198:3924952:393752239375223938331810Salmonella enterica subsp. enterica serovar Typhi str. CT18,lipopolysaccharide core biosynthesis protein RfaZ1e-108392
NC_004631:3910451:392302139230213923830810Salmonella enterica subsp. enterica serovar Typhi Ty2, completelipopolysaccharide core biosynthesis protein RfaZ1e-108392
NC_016832:3900000:391181839118183912627810Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide core biosynthesis protein rfaZ1e-108392
NC_006511:3690828:369875136987513699560810Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCClipopolysaccharide core biosynthesis protein RfaZ1e-108392
NC_011147:3686500:369442836944283695237810Salmonella enterica subsp. enterica serovar Paratyphi A strlipopolysaccharide core biosynthesis protein1e-108392
NC_010067:3846962:385827538582753859084810Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-108392
NC_002947:3404000:340464734046473405480834Pseudomonas putida KT2440, complete genomelipopolysaccharide core biosynthesis protein, putative1e-1893.6
NC_017986:5509569:550956955095695510285717Pseudomonas putida ND6 chromosome, complete genomehypothetical protein7e-1891.3
NC_010501:3013103:302018930201893020977789Pseudomonas putida W619, complete genomelipopolysaccharide core biosynthesis domain protein1e-1480.5