Query: NC_011593:1651635 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,
Start: 1651635, End: 1674434, Length: 22800
Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria
General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_015052:1030708* | 1030708 | 1069472 | 38765 | Bifidobacterium longum subsp. infantis 157F, complete genome | 0 | 4121 | BLASTN svg | BLASTP svg |
NC_006361:1547034* | 1547034 | 1576759 | 29726 | Nocardia farcinica IFM 10152, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_006177:520055 | 520055 | 540538 | 20484 | Symbiobacterium thermophilum IAM 14863, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_015859:1099919* | 1099919 | 1133504 | 33586 | Corynebacterium variabile DSM 44702 chromosome, complete genome | 8e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_015873:2105847 | 2105847 | 2141084 | 35238 | Megasphaera elsdenii DSM 20460, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012470:853561* | 853561 | 884267 | 30707 | Streptococcus equi subsp. zooepidemicus, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_002696:1154996* | 1154996 | 1177186 | 22191 | Caulobacter crescentus CB15, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_012560:1322000 | 1322000 | 1357145 | 35146 | Azotobacter vinelandii DJ, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_021150:1322000 | 1322000 | 1357157 | 35158 | Azotobacter vinelandii CA6, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_007761:241900* | 241900 | 262635 | 20736 | Rhizobium etli CFN 42, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_014844:903877* | 903877 | 926431 | 22555 | Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome | 7e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_011769:3434744 | 3434744 | 3463682 | 28939 | Desulfovibrio vulgaris str. 'Miyazaki F', complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_011134:1222739* | 1222739 | 1247928 | 25190 | Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010617:1467000* | 1467000 | 1485187 | 18188 | Kocuria rhizophila DC2201, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_016027:2387832* | 2387832 | 2410099 | 22268 | Gluconacetobacter xylinus NBRC 3288, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_007492:3332839 | 3332839 | 3354179 | 21341 | Pseudomonas fluorescens PfO-1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |