Pre_GI: BLASTP Hits

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Query: NC_011369:3022235:3028613 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 3028613, End: 3029644, Length: 1032

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019973:5650646:5676912567691256779281017Mesorhizobium australicum WSM2073, complete genomeexopolysaccharide biosynthesis protein1e-134479
NC_015675:6276357:6302623630262363036391017Mesorhizobium opportunistum WSM2075 chromosome, complete genomepolysaccharide pyruvyl transferase1e-134479
NC_008702:3580380:3590109359010935911521044Azoarcus sp. BH72, complete genomepolysaccharide polymerase1e-49196
NC_020304:3751710:3767741376774137687661026Desulfocapsa sulfexigens DSM 10523, complete genomeexopolysaccharide biosynthesis protein2e-34146
NC_016513:1958500:198484619848461985802957Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completepolysaccharide pyruvyl transferase YvfF1e-31137
NC_013416:1621469:164690616469061647862957Aggregatibacter actinomycetemcomitans D11S-1, complete genomepolysaccharide pyruvyl transferase YvfF1e-31137
NC_015663:4950000:498730249873024988249948Enterobacter aerogenes KCTC 2190 chromosome, complete genomepolysaccharide pyruvyl transferase yvff8e-29127
NC_013410:2519441:253664825366482537607960Fibrobacter succinogenes subsp. succinogenes S85 chromosome,polysaccharide pyruvyl transferase7e-27121
NC_009615:1627961:163971016397101640675966Parabacteroides distasonis ATCC 8503 chromosome, complete genomeexopolysaccharide biosynthesis protein galactosyltransferase1e-24114
NC_007952:1453000:146307014630701464023954Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein6e-24111
NC_011283:1690193:170310417031041704054951Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein8e-24111
NC_020064:1547524:156871615687161569672957Serratia marcescens FGI94, complete genomeexopolysaccharide biosynthesis protein2e-23110
NC_009615:2184300:2198060219806021990611002Parabacteroides distasonis ATCC 8503 chromosome, complete genomepolysaccharide pyruvyl transferase YvfF2e-21103
NC_016023:3391116:3397366339736633983971032Bacillus coagulans 36D1 chromosome, complete genomepolysaccharide pyruvyl transferase1e-20100
NC_015172:1621223:1637423163742316394712049Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeglycosyl transferase family 26e-1685.1
NC_020207:843822:8511858511858523061122Enterococcus faecium NRRL B-2354, complete genomeYveS8e-1375.1
NC_015152:272500:2957242957242968241101Spirochaeta sp. Buddy chromosome, complete genomepolysaccharide pyruvyl transferase2e-0963.5