Pre_GI: BLASTP Hits

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Query: NC_011094:1923870:1933565 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 1933565, End: 1933765, Length: 201

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:1957263:196696019669601967154195Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein5e-29126
NC_012125:1897611:192106019210601921254195Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-29126
NC_011205:1391971:141197214119721412166195Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein5e-29126
NC_011083:1993672:200336220033622003556195Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein5e-29126
NC_006905:1961774:197148819714881971682195Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein5e-29126
NC_011149:1236689:124117612411761241370195Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-28124
NC_011080:1944226:196057219605721960766195Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-28124
NC_016831:1690811:170049117004911700685195Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-28123
NC_016832:1090274:110275811027581102952195Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-26117