Pre_GI: BLASTP Hits

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Query: NC_010610:1178430:1205042 Lactobacillus fermentum IFO 3956, complete genome

Start: 1205042, End: 1206934, Length: 1893

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015975:923812:9357169357169375991884Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSNF2 family helicase0946
NC_015391:2523451:2523451252345125258952445Carnobacterium sp. 17-4 chromosome, complete genomehypothetical protein1e-153544
NC_008618:1526392:1535700153570015383722673Bifidobacterium adolescentis ATCC 15703, complete genomehelicase6e-146518
NC_015152:2831566:2841216284121628432071992Spirochaeta sp. Buddy chromosome, complete genomeSNF2-related protein5e-69262
NC_017186:10070795:1007973810079738100815641827Amycolatopsis mediterranei S699 chromosome, complete genomeDNA/RNA helicase3e-49197
NC_014318:10070730:1007967310079673100814991827Amycolatopsis mediterranei U32 chromosome, complete genomeDNA/RNA helicase3e-49197
NC_016582:6999074:7005073700507370068901818Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative DNA-binding protein3e-49197
NC_016114:3439273:3447609344760934494291821Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeSNF2-like protein1e-46188
NC_018681:7191008:7202474720247472043091836Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein1e-46188
NC_013929:6343000:6360240636024063619941755Streptomyces scabiei 87.22 chromosome, complete genomeDNA-binding protein2e-46187
NC_017098:986428:1000534100053410023481815Spirochaeta africana DSM 8902 chromosome, complete genomeDNA/RNA helicase2e-40167
NC_015589:366296:3752763752763770751800Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelicase domain-containing protein1e-37158
NC_008687:965152:9753979753979773071911Paracoccus denitrificans PD1222 chromosome 2, complete sequencehelicase domain protein6e-29129
NC_010337:2848360:2851573285157328529221350Heliobacterium modesticaldum Ice1, complete genomesnf2 family helicase3e-1997.4
NC_015259:1803266:1814614181461418160591446Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHelicase domain protein1e-1792
NC_016627:4323370:4365269436526943667141446Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA/RNA helicase2e-1791.3
NC_014972:3000138:3010901301090130149924092Desulfobulbus propionicus DSM 2032 chromosome, complete genomeSNF2-like protein2e-1584.7
NC_017243:1197586:1205298120529812083993102Brachyspira intermedia PWS/A chromosome, complete genomeHepA, Superfamily II D/R helicase, SNF2 family6e-1583.2
NC_014330:195447:2257382257382287553018Brachyspira pilosicoli 95/1000 chromosome, complete genomeHepA Superfamily II D R helicase3e-1480.9
NC_009831:2884851:2902811290281129060833273Shewanella sediminis HAW-EB3, complete genomeNon-specific serine/threonine protein kinase2e-1275.1
NC_014393:1590893:1631067163106716343033237Clostridium cellulovorans 743B chromosome, complete genomeSNF2-related protein9e-1272.4
NC_015634:2492771:2513066251306625160442979Bacillus coagulans 2-6 chromosome, complete genomeSNF2 helicase associated domain-containing protein3e-1170.9
NC_020388:1869000:1890950189095018927041755Natronomonas moolapensis 8.8.11 complete genomeATP-dependent helicase1e-1068.9
NC_011725:5169135:5169135516913551718912757Bacillus cereus B4264 chromosome, complete genomehelicase2e-1068.2
NC_013441:382597:4177384177384212173480Gordonia bronchialis DSM 43247, complete genomeSNF2-related protein3e-1067.8
NC_013922:331847:3771213771213788751755Natrialba magadii ATCC 43099 chromosome, complete genomehelicase domain protein3e-0964.3
NC_016627:3205333:3248407324840732516973291Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA/RNA helicase3e-0963.9
NC_010674:2417199:2431174243117424343263153Clostridium botulinum B str. Eklund 17B, complete genomeimitation switch iswi6e-0963.2
NC_009481:2204629:2229205222920522324173213Synechococcus sp. WH 7803 chromosome, complete genomeSNF2 family DNA/RNA helicase8e-0962.8
NC_009482:2051890:2075338207533820783883051Synechococcus sp. RCC307 chromosome, complete genomeSNF2 family DNA/RNA helicase1e-0862
NC_016751:1776669:1778274177827417812402967Marinitoga piezophila KA3 chromosome, complete genomeDNA/RNA helicase2e-0861.6
NC_012028:514000:1025010250120041755Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genomehelicase domain protein5e-0860.1
NC_005125:2887319:2908436290843629116363201Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0757.8
NC_015510:6842692:6862351686235168649722622Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeSNF2-like protein5e-0757
NC_014652:1091610:1109840110984011126592820Caldicellulosiruptor hydrothermalis 108 chromosome, completesnf2-related protein6e-0756.6
NC_009077:874164:8851148851148884823369Mycobacterium sp. JLS, complete genomeSNF2-related protein2e-0654.7
NC_019940:3518670:3533954353395435359451992Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA/RNA helicase3e-0654.3