Pre_GI Gene

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Host: NC_009831 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009831:2884851 Shewanella sediminis HAW-EB3, complete genome

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
288485128863021452flp pilus assembly protein secretin CpaCQuickGO ontologyBLASTP
28863432887167825Flp pilus assembly protein CpaB-like proteinQuickGO ontologyBLASTP
288720828885241317hypothetical proteinBLASTP
28885262889101576hypothetical proteinBLASTP
28892072889407201hypothetical proteinBLASTP
28900162890468453transposase and inactivated derivativeQuickGO ontologyBLASTP
289047228919231452hypothetical proteinBLASTP
28922842892526243hypothetical protein
289257428946492076hypothetical proteinBLASTP
289486128961021242conserved hypothetical GGDEF family proteinQuickGO ontologyBLASTP
28967012897642942glycosyltransferase group 2 family proteinQuickGO ontologyBLASTP
28976862898417732generic methyltransferaseQuickGO ontologyBLASTP
289848829000951608hypothetical proteinBLASTP
29005622900981420protein of unknown function UPF0047QuickGO ontologyBLASTP
29010112901775765hypothetical proteinBLASTP
29020722902758687flagellin-like proteinQuickGO ontologyBLASTP
290281129060833273Non-specific serinethreonine protein kinaseQuickGO ontologyBLASTP
29064042907171768cytochrome b561QuickGO ontologyBLASTP
290732929095542226hypothetical proteinBLASTP
290992429111831260Fmu Sun domain proteinQuickGO ontologyBLASTP
291132829127161389DEADDEAH box helicase domain proteinQuickGO ontologyBLASTP