Pre_GI: BLASTP Hits

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Query: NC_010501:3671517:3703093 Pseudomonas putida W619, complete genome

Start: 3703093, End: 3704541, Length: 1449

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020541:2694836:2705471270547127069011431Rhodanobacter sp. 2APBS1, complete genomehypothetical protein5e-158558
NC_009617:3263413:3269030326903032704661437Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein2e-123442
NC_007520:407627:4215274215274229721446Thiomicrospira crunogena XCL-2, complete genomehypothetical protein3e-118426
NC_002927:506183:5160365160365174691434Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-117422
NC_008322:1186000:1199709119970912011421434Shewanella sp. MR-7, complete genomehypothetical protein1e-107390
NC_015381:2859000:2906549290654929079971449Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-64247
NC_013316:81969:8249082490838661377Clostridium difficile R20291, complete genomehypothetical protein8e-41168
NC_015703:3880903:389009638900963890551456Runella slithyformis DSM 19594 chromosome, complete genome1e-40167
NC_007930:130948:144031144031144711681Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,hypothetical protein4e-1583.2
NC_012673:2535427:2566208256620825691832976Exiguobacterium sp. AT1b, complete genomehypothetical protein2e-1377.8
NC_014623:6651798:6677958667795866801352178Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-1377
NC_012731:2974745:298410029841002984996897Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-1274.7
NC_013720:5769910:5826577582657758293872811Pirellula staleyi DSM 6068, complete genomehypothetical protein3e-1170.1
NC_014311:3076519:309878030987803099577798Ralstonia solanacearum PSI07 chromosome, complete genomesir2 domain7e-1168.9
NC_017986:5867782:5874074587407458776043531Pseudomonas putida ND6 chromosome, complete genomehypothetical protein8e-1168.9
NC_008260:2142311:215052021505202151308789Alcanivorax borkumensis SK2, complete genomeSIR2 family protein9e-1168.6
NC_020244:747762:7550637550637563431281Bacillus subtilis XF-1, complete genomeputative phosphohydrolase3e-1067
NC_007925:138927:159795159795160622828Rhodopseudomonas palustris BisB18, complete genomeNAD-dependent protein deacetylases, SIR2 family4e-1066.6
NC_013757:3651646:366621136662113667188978Geodermatophilus obscurus DSM 43160, complete genomehypothetical protein4e-1066.6
NC_012793:1718000:1729792172979217312941503Geobacillus sp. WCH70, complete genomehypothetical protein4e-1066.6
NC_012560:1677798:168861516886151689499885Azotobacter vinelandii DJ, complete genomehypothetical protein5e-1066.2
NC_021150:1677811:168862816886281689512885Azotobacter vinelandii CA6, complete genomehypothetical protein5e-1066.2
NC_015674:1114915:1122144112214411244952352Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein7e-1065.9
NC_018581:2768743:277599927759992776808810Gordonia sp. KTR9 chromosome, complete genomehypothetical protein3e-0963.9
NC_008146:861319:9370619370619385031443Mycobacterium sp. MCS, complete genomehypothetical protein6e-0962.8
NC_008705:868623:9427759427759443101536Mycobacterium sp. KMS, complete genomeconserved hypothetical protein6e-0962.8
NC_012526:765000:7905287905287943193792Deinococcus deserti VCD115, complete genomehypothetical protein4e-0859.7
NC_016906:181254:1860811860811875531473Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein2e-0757.8
NC_012491:3736167:3766116376611637695353420Brevibacillus brevis NBRC 100599, complete genomehypothetical protein3e-0757
NC_013456:3011518:3019889301988930234883600Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein4e-0756.6
NC_020260:3355814:3378046337804633815313486Cronobacter sakazakii Sp291, complete genomehypothetical protein4e-0756.6
NC_004547:442927:4693964693964728843489Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein8e-0755.8
NC_014500:2688095:269758626975862698464879Dickeya dadantii 3937 chromosome, complete genomeUSG protein9e-0755.5
NC_015556:819503:8271268271268286821557Pseudomonas fulva 12-X chromosome, complete genomephage protein2e-0654.7
NC_015572:4063150:4064370406437040661961827Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-0654.3
NC_014837:2458780:2468381246838124697061326Pantoea sp. At-9b chromosome, complete genomeTIR protein2e-0654.3
NC_010162:1767296:1772132177213217733941263Sorangium cellulosum 'So ce 56', complete genomehypothetical protein2e-0653.9
NC_010498:4072681:4082773408277340854932721Escherichia coli SMS-3-5, complete genomehypothetical protein4e-0653.1
NC_015711:8424144:843315884331588433793636Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-0652.8