Pre_GI: BLASTP Hits

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Query: NC_010488:48868:52623 Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequence

Start: 52623, End: 53036, Length: 414

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002128:35000:414114141141983573Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein8e-34142
NC_007414:56508:633376333764113777Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein2e-0961.2
NC_002128:35000:407624076241538777Escherichia coli O157:H7 str. Sakai plasmid pO157, completehypothetical protein2e-0961.2
NC_017319:155958:164585164585165355771Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein2e-0961.2
NC_004851:157675:165923165923166693771Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein2e-0961.2