Pre_GI: BLASTP Hits

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Query: NC_009512:2108686:2137453 Pseudomonas putida F1, complete genome

Start: 2137453, End: 2138814, Length: 1362

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4790482:4837064483706448383291266Pseudomonas putida ND6 chromosome, complete genomechloride channel core protein0635
NC_020829:940692:9731959731959745501356Pseudomonas denitrificans ATCC 13867, complete genomechloride channel core protein3e-138491
NC_010678:114000:1192601192601205671308Ralstonia pickettii 12J chromosome 2, complete sequenceChloride channel core9e-56218
NC_012857:557911:5630545630545643611308Ralstonia pickettii 12D chromosome 2, complete genomeChloride channel core9e-56218
NC_015381:992401:9934019934019949841584Burkholderia gladioli BSR3 chromosome 1, complete sequenceCl- channel voltage-gated family protein2e-53210
NC_007509:3668:5901259012603311320Burkholderia sp. 383 chromosome 3, complete sequenceCl- channel, voltage gated4e-51202
NC_009074:2914053:2914053291405329157411689Burkholderia pseudomallei 668 chromosome I, complete sequencevoltage gated chloride channel family protein3e-49196
NC_010676:2621496:2629423262942326307481326Burkholderia phytofirmans PsJN chromosome 2, complete sequenceChloride channel core6e-48191
NC_015138:5342473:5343832534383253452261395Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeCl- channel voltage-gated family protein7e-39162
NC_012660:2684981:2705726270572627070481323Pseudomonas fluorescens SBW25 chromosome, complete genomeputative chloride transport channel membrane protein2e-38160
NC_007298:750361:7656287656287669471320Dechloromonas aromatica RCB, complete genomeCl- channel, voltage gated5e-38159
NC_014752:2087998:2089290208929020906991410Neisseria lactamica ST-640, complete genomechloride channel protein1e-35150
NC_010120:199942:1999421999422012641323Neisseria meningitidis 053442, complete genomechloride channel protein-related protein2e-35150
NC_017513:2017000:2033062203306220344711410Neisseria meningitidis G2136 chromosome, complete genomechloride transporter, ClC family3e-35150
NC_008767:2010140:2026291202629120276131323Neisseria meningitidis FAM18, complete genomehypothetical inner membrane protein8e-35148
NC_013205:1123280:1155829115582911575831755Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Cl- channel voltage-gated family protein3e-1377
NC_008340:480399:4803994803994821261728Alkalilimnicola ehrlichei MLHE-1, complete genomeCl- channel, voltage-gated family protein1e-1068.6
NC_009257:5615:6084608475021419Francisella tularensis subsp. tularensis WY96-3418 chromosome,chloride channel protein6e-1065.9
NC_008369:82515:9647596475978931419Francisella tularensis subsp. holarctica OSU18, complete genomeCLC family chloride ion channel antiporter7e-1065.9
NC_009749:77583:9653396533978761344Francisella tularensis subsp. holarctica FTA, complete genomechloride channel protein1e-0965.1
NC_008245:1845525:1864990186499018665191530Francisella tularensis subsp. tularensis FSC 198, complete genomeVoltage-gated ClC-type chloride channel clcA1e-0965.1
NC_016937:1850382:1863731186373118665652835Francisella tularensis subsp. tularensis TI0902 chromosome,Thermostable carboxypeptidase 18e-0962
NC_013166:417862:4182924182924200671776Kangiella koreensis DSM 16069, complete genomeChloride channel core6e-0859.3
NC_015437:2331082:2349778234977823513461569Selenomonas sputigena ATCC 35185 chromosome, complete genomeCl- channel voltage-gated family protein9e-0858.5
NC_014532:2298628:2300945230094523027231779Halomonas elongata DSM 2581, complete genomeK03281 chloride channel protein, CIC family1e-0758.5
NC_014640:6971000:6989479698947969908461368Achromobacter xylosoxidans A8 chromosome, complete genomevoltage gated chloride channel family protein 32e-0757.8
NC_011601:149428:1858671858671872881422Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomechloride channel protein5e-0756.2
NC_017168:3192817:3208417320841732097091293Yersinia pestis A1122 chromosome, complete genomeputative voltage-gated ClC-type chloride channel ClcB8e-0755.5
NC_011126:555483:5620315620315634581428Hydrogenobaculum sp. Y04AAS1, complete genomeChloride channel core2e-0654.3