Pre_GI: BLASTP Hits

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Query: NC_009456:998935:1014951 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 1014951, End: 1015844, Length: 894

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:242760:245125245125246018894Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-173607
NC_013892:992811:101285910128591013587729Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-1272.8
NC_004578:4499143:451756145175614518493933Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1067
NC_008751:1736512:174973017497301750665936Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein4e-0962
NC_011883:303980:303980303980304954975Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein4e-0858.9