Pre_GI: BLASTN Hits

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Query: NC_009380:2253500 Salinispora tropica CNB-440 chromosome, complete genome

Start: 2253500, End: 2277607, Length: 24108

Host Lineage: Salinispora tropica; Salinispora; Micromonosporaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from coarse beach sand off the Bahamas. An obligate marine actinomycete. Salinispora strains are commonly isolated from tropical marine sediment. Members of this genus produce branched hyphae and require media which contain seawater or sodium. A survey of the cultured species identified over 90 isolates which produce compounds that inhibited cancer cells. These organisms may be a new source of bioactive chemicals for use in disease and cancer treatments. This species produces the chemicals salinosporamide A and B which may be useful for cancer treatment.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007777:10188241018824104517626353Frankia sp. CcI3, complete genome3e-34155BLASTN svgBLASTP svg
NC_007777:30009413000941302809927159Frankia sp. CcI3, complete genome2e-32149BLASTN svgBLASTP svg
NC_018681:69776706977670700159923930Nocardia brasiliensis ATCC 700358 chromosome, complete genome9e-22113BLASTN svgBLASTP svg
NC_006361:5146000*5146000517359927600Nocardia farcinica IFM 10152, complete genome2e-19105BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome5e-1487.7BLASTN svgBLASTP svg
NC_013131:10370765*103707651039309922335Catenulispora acidiphila DSM 44928, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_010816:1274702*1274702129873624035Bifidobacterium longum DJO10A, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007948:46206614620661464325222592Polaromonas sp. JS666, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014151:10337361033736105609922364Cellulomonas flavigena DSM 20109 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013172:783097*78309780703523939Brachybacterium faecium DSM 4810, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009480:2932108*2932108295389521788Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete5e-0867.9BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011894:792827928211536336082Methylobacterium nodulans ORS 2060, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007333:11298261129826115911729292Thermobifida fusca YX, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015634:3017564*3017564305008732524Bacillus coagulans 2-6 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013235:2129982*2129982217218542204Nakamurella multipartita DSM 44233, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013172:30934673093467314444250976Brachybacterium faecium DSM 4810, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013093:42478114247811427081623006Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008391:24044432404443242322518783Burkholderia cepacia AMMD chromosome 2, complete sequence3e-0661.9BLASTN svgBLASTP svg