Pre_GI: BLASTP Hits

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Query: NC_008593:2281896:2303257 Clostridium novyi NT, complete genome

Start: 2303257, End: 2303529, Length: 273

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2528549:255342225534222553712291Clostridium botulinum BKT015925 chromosome, complete genomechorismate mutase4e-30129
NC_014614:757381:7732637732637743721110Clostridium sticklandii, complete genomePheA7e-1682.4
NC_008261:817295:827786827786828079294Clostridium perfringens ATCC 13124, complete genomechorismate mutase2e-1271.2
NC_003366:863437:873958873958874251294Clostridium perfringens str. 13, complete genomehypothetical protein3e-1270.5
NC_008262:784878:812966812966813259294Clostridium perfringens SM101, complete genomechorismate mutase6e-1269.3
NC_012925:1357783:137848813784881378766279Streptococcus suis P1/7, complete genomechorismate mutase type II protein7e-1165.9
NC_009442:1446508:146721514672151467493279Streptococcus suis 05ZYH33 chromosome, complete genomechorismate mutase7e-1165.9
NC_009443:1445936:146663614666361466914279Streptococcus suis 98HAH33, complete genomechorismate mutase7e-1165.9
NC_012924:1446190:146689714668971467175279Streptococcus suis SC84, complete genomechorismate mutase type II protein7e-1165.9
NC_012926:1496510:151723615172361517514279Streptococcus suis BM407 chromosome, complete genomechorismate mutase type II protein7e-1165.9
NC_013928:797714:805664805664805936273Streptococcus mutans NN2025, complete genomechorismate mutase1e-0961.6
NC_003454:677699:682841682841683101261Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeShikimate 5-dehydrogenase3e-0857.4
NC_009785:1414892:143172314317231431989267Streptococcus gordonii str. Challis substr. CH1, complete genomechorismate mutase8e-0752.4
NC_020054:3132478:3139356313935631404561101Fibrella aestuarina BUZ 2 drat genomeDAHP synthetase I/KDSA4e-0650.1
NC_012913:626449:6504936504936516171125Aggregatibacter aphrophilus NJ8700, complete genomechorismate mutase/prephenate dehydrogenase6e-0649.7