Pre_GI: BLASTP Hits

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Query: NC_008593:1917118:1953746 Clostridium novyi NT, complete genome

Start: 1953746, End: 1954399, Length: 654

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2144639:217876321787632179416654Clostridium botulinum BKT015925 chromosome, complete genome3-oxoacid CoA-transferase subunit B3e-109394
NC_012785:638000:644587644587645246660Kosmotoga olearia TBF 19.5.1, complete genome3-oxoacid CoA-transferase, B subunit1e-66252
NC_020291:2487575:249613724961372496796660Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomebutyrate--acetoacetate CoA-transferase subunit B1e-65249
NC_009718:203998:214867214867215517651Fervidobacterium nodosum Rt17-B1, complete genome3-oxoacid CoA-transferase, B subunit2e-64245
NC_014614:1259236:127595912759591276606648Clostridium sticklandii, complete genomeacetyl-CoA:acetoacetyl-CoA transferase, beta subunit5e-64243
NC_015711:6522808:655595065559506556606657Myxococcus fulvus HW-1 chromosome, complete genome3-oxoacid CoA-transferase subunit B1e-63242
NC_016751:469289:475170475170475820651Marinitoga piezophila KA3 chromosome, complete genome3-oxoacid CoA-transferase subunit B3e-63241
NC_003454:339345:345583345583346236654Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeButyrate-acetoacetate CoA-transferase subunit B3e-62237
NC_010338:4148667:416498441649844165631648Caulobacter sp. K31, complete genome3-oxoacid CoA-transferase, B subunit1e-59229
NC_011894:2359128:237904023790402379666627Methylobacterium nodulans ORS 2060, complete genome3-oxoacid CoA-transferase, B subunit2e-59228
NC_010003:1126800:115088611508861151536651Petrotoga mobilis SJ95, complete genome3-oxoacid CoA-transferase, B subunit3e-59228
NC_004193:2692136:270086827008682701530663Oceanobacillus iheyensis HTE831, complete genomebutyate-acetoacetate CA-transferase large chain2e-58225
NC_016510:1958453:196398119639811964637657Flavobacterium columnare ATCC 49512 chromosome, complete genome3-oxoacid CoA-transferase subunit B family protein AtoA4e-58224
NC_012470:580373:603113603113603757645Streptococcus equi subsp. zooepidemicus, complete genomeacetate CoA-transferase beta subunit5e-58224
NC_009454:259022:279910279910280572663Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase, beta subunit7e-58223
NC_008700:1627401:164519216451921645848657Shewanella amazonensis SB2B, complete genome3-oxoacid CoA-transferase5e-57220
NC_011283:2323687:234602723460272346683657Klebsiella pneumoniae 342 chromosome, complete genome3-oxoacid CoA-transferase subunit B2e-56219
NC_015737:879545:879545879545880201657Clostridium sp. SY8519, complete genomehypothetical protein5e-56217
NC_020210:2044944:206240720624072063075669Geobacillus sp. GHH01, complete genomesuccinyl CoA:3-oxoacid CoA-transferase subunit B1e-55216
NC_008345:3287000:328773132877313288387657Shewanella frigidimarina NCIMB 400, complete genome3-oxoacid CoA-transferase, B subunit3e-55214
NC_012779:2127542:212689521268952127545651Edwardsiella ictaluri 93-146, complete genomeacetate CoA-transferase subunit beta6e-55213
NC_015673:525638:545198545198545836639Corynebacterium resistens DSM 45100 chromosome, complete genome3-oxoacid CoA-transferase subunit B4e-53207
NC_017192:88940:101833101833102465633Arcobacter sp. L, complete genomeputative 3-oxoacid CoA-transferase beta subunit9e-53206
NC_015514:3351052:335536733553673356041675Cellulomonas fimi ATCC 484 chromosome, complete genome3-oxoacid CoA-transferase subunit B2e-52204
NC_014958:557208:581357581357581986630Deinococcus maricopensis DSM 21211 chromosome, complete genome3-oxoacid CoA-transferase subunit B3e-51201
NC_010170:1219641:123181512318151232453639Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit B6e-50197
NC_006834:787500:814923814923815552630Xanthomonas oryzae pv. oryzae KACC10331, complete genomeIpsJ protein4e-49194
NC_013939:1927424:1941123194112319424631341Deferribacter desulfuricans SSM1, complete genome3-oxoacid CoA-transferase3e-49194
NC_001264:28266:5812258122595161395Deinococcus radiodurans R1 chromosome 2, complete sequencesuccinyl-CoA:3-ketoacid-CoA transferase, putative3e-48191
NC_021171:1689518:170285417028541703504651Bacillus sp. 1NLA3E, complete genomeScoB protein5e-48190
NC_010170:4409683:442517644251764425814639Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit B2e-47188
NC_007953:572926:592790592790593425636Burkholderia xenovorans LB400 chromosome 3, complete sequence3-oxoacid CoA-transferase, subunit B1e-45182
NC_020911:3076791:309762530976253098311687Octadecabacter antarcticus 307, complete genomefamily I CoA-transferase subunit B6e-45180
NC_010552:58294:582945829458950657Burkholderia ambifaria MC40-6 chromosome 2, complete sequence3-oxoacid CoA-transferase, B subunit2e-42172
NC_008061:2368517:239532523953252395981657Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence3-oxoacid CoA-transferase, subunit B1e-42172
NC_007511:3512100:353156535315653532221657Burkholderia sp. 383 chromosome 2, complete sequence3-oxoadipate CoA-transferase1e-42172
NC_011001:63986:639866398664642657Burkholderia cenocepacia J2315 chromosome 2, complete sequence3-oxoadipate CoA-transferase subunit B1e-42172
NC_014931:5573942:559059355905935591240648Variovorax paradoxus EPS chromosome, complete genome3-oxoacid CoA-transferase, B subunit6e-42170
NC_017986:4790482:484228948422894842930642Pseudomonas putida ND6 chromosome, complete genome3-oxoadipate CoA-transferase, subunit B1e-39162
NC_017986:5833819:585352458535245854246723Pseudomonas putida ND6 chromosome, complete genome4-methyl-3-oxoadipate CoA-transferase beta-subunit7e-39160
NC_011881:89705:110604110604111275672Arthrobacter chlorophenolicus A6 plasmid pACHL02, complete3-oxoacid CoA-transferase, B subunit4e-38157
NC_009512:5920960:593841259384125939053642Pseudomonas putida F1, complete genome3-oxoacid CoA-transferase, B subunit3e-37155
NC_014640:4951076:497611549761154976777663Achromobacter xylosoxidans A8 chromosome, complete genome3-oxoadipate CoA-transferase subunit B7e-37153
NC_016604:3184855:322667732266773227360684Mycobacterium rhodesiae NBB3 chromosome, complete genome3-oxoacid CoA-transferase subunit B1e-33142
NC_008705:1839983:184649518464951847217723Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, B subunit2e-32139
NC_009077:1725683:177916317791631779885723Mycobacterium sp. JLS, complete genome3-oxoacid CoA-transferase, B subunit2e-32139
NC_008705:1839983:185991018599101860632723Mycobacterium sp. KMS, complete genome3-oxoacid CoA-transferase, B subunit2e-32139
NC_010617:665830:669995669995670669675Kocuria rhizophila DC2201, complete genome3-oxoadipate CoA-transferase subunit B2e-32138
NC_010170:1470755:148115114811511481471321Bordetella petrii, complete genome3-oxoacid CoA-transferase subunit B, fragment2e-23109
NC_020291:2291418:2296114229611422976581545Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeacyl CoA:acetate/3-ketoacid CoA transferase2e-1582.8
NC_015737:2691246:2738530273853027401131584Clostridium sp. SY8519, complete genomehypothetical protein4e-1478.2
NC_011660:366000:3854333854333870161584Listeria monocytogenes HCC23 chromosome, complete genomepropionate CoA-transferase8e-1477
NC_003212:2293425:2293425229342522950081584Listeria innocua Clip11262, complete genomehypothetical protein1e-1376.6
NC_014330:697429:7077997077997093971599Brachyspira pilosicoli 95/1000 chromosome, complete genomebifunctional acetyl-CoA:acetoacetyl-CoA transferase subunit alpha/beta1e-1376.6
NC_019908:2496149:2509209250920925108101602Brachyspira pilosicoli P43/6/78 chromosome, complete genomebifunctional acetyl-CoA:acetoacetyl-CoA transferase subunit alpha/beta1e-1376.6
NC_015873:1241354:1260304126030412618541551Megasphaera elsdenii DSM 20460, complete genomecoenzyme A transferase5e-1374.7
NC_009454:489954:5028455028455043981554Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase5e-1374.7
NC_015737:1441086:1448670144867014502261557Clostridium sp. SY8519, complete genomehypothetical protein7e-1373.9
NC_009376:769199:7862787862787879091632Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomecoenzyme A transferase8e-1270.5
NC_014632:312000:3149883149883165621575Ilyobacter polytropus DSM 2926 chromosome, complete genomepropionate CoA-transferase4e-1168.2
NC_009454:1577319:1611070161107016126321563Pelotomaculum thermopropionicum SI, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase3e-1065.1
NC_009617:2355662:2370773237077323723291557Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecoenzyme A transferase4e-1064.7
NC_002578:877609:8776098776098794051797Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein7e-1063.9
NC_003366:128783:1320701320701336201551Clostridium perfringens str. 13, complete genomepropionate CoA-transferase1e-0963.5
NC_009454:1577319:1655509165550916568101302Pelotomaculum thermopropionicum SI, complete genomeacylCoA:acetate/3-ketoacidcoatransferase1e-0963.5
NC_011894:2747491:2756359275635927582991941Methylobacterium nodulans ORS 2060, complete genomecoenzyme A transferase2e-0962.4
NC_007347:1596040:1612668161266816146772010Ralstonia eutropha JMP134 chromosome 1, complete sequenceCoenzyme A transferase2e-0962.4
NC_019962:1750497:1865701186570118672691569Natrinema pellirubrum DSM 15624, complete genomeacyl CoA:acetate/3-ketoacid CoA transferase3e-0961.6
NC_010511:871905:8946088946088966112004Methylobacterium sp. 4-46 chromosome, complete genomecoenzyme A transferase7e-0960.8
NC_013757:3613438:3616616361661636185171902Geodermatophilus obscurus DSM 43160, complete genomecoenzyme A transferase9e-0960.5
NC_007644:1293701:1301959130195913035421584Moorella thermoacetica ATCC 39073, complete genomeCoenzyme A transferase5e-0857.8
NC_008554:4781500:4791378479137847929581581Syntrophobacter fumaroxidans MPOB, complete genomecoenzyme A transferase1e-0757
NC_007963:317291:339037339037339813777Chromohalobacter salexigens DSM 3043, complete genomecoenzyme A transferase7e-0754.3