Query: NC_008543:2474002 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence
Start: 2474002, End: 2494499, Length: 20498
Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008061:2773670 | 2773670 | 2799999 | 26330 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 0 | 38270 | BLASTN svg | BLASTP svg |
| NC_010515:1900967 | 1900967 | 1924544 | 23578 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 0 | 36860 | BLASTN svg | BLASTP svg |
| NC_010086:1816378 | 1816378 | 1889768 | 73391 | Burkholderia multivorans ATCC 17616 chromosome 2, complete | 0 | 1320 | BLASTN svg | BLASTP svg |
| NC_011146:896000* | 896000 | 918403 | 22404 | Geobacter bemidjiensis Bem, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_015733:1976752 | 1976752 | 2001341 | 24590 | Pseudomonas putida S16 chromosome, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_004578:1719849* | 1719849 | 1742217 | 22369 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_007348:752692 | 752692 | 777451 | 24760 | Ralstonia eutropha JMP134 chromosome 2, complete sequence | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_007005:4515853 | 4515853 | 4545822 | 29970 | Pseudomonas syringae pv. syringae B728a, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_010505:4396800 | 4396800 | 4416518 | 19719 | Methylobacterium radiotolerans JCM 2831, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_011894:2503639 | 2503639 | 2522099 | 18461 | Methylobacterium nodulans ORS 2060, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_011894:1499229* | 1499229 | 1525979 | 26751 | Methylobacterium nodulans ORS 2060, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011894:6708970 | 6708970 | 6728820 | 19851 | Methylobacterium nodulans ORS 2060, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009439:4913767 | 4913767 | 4936099 | 22333 | Pseudomonas mendocina ymp, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015563:313283 | 313283 | 334925 | 21643 | Delftia sp. Cs1-4 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014119:977136 | 977136 | 995099 | 17964 | Burkholderia sp. CCGE1002 chromosome chromosome 3, complete | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| NC_002488:1638946 | 1638946 | 1700655 | 61710 | Xylella fastidiosa 9a5c, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |