Pre_GI: BLASTP Hits

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Query: NC_008543:127675:151967 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence

Start: 151967, End: 153118, Length: 1152

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008061:2106848:2116651211665121178021152Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein9e-175613
NC_010515:1124298:1134103113410311352541152Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-166585
NC_011001:372185:3834953834953846461152Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative type IV secretion system protein VirB65e-161567
NC_009254:365812:3682773682773694401164Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-102373
NC_010676:2793237:2792080279208027932401161Burkholderia phytofirmans PsJN chromosome 2, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein8e-99360
NC_010524:933191:9331919331919342281038Leptothrix cholodnii SP-6, complete genomeTrbL/VirB6 plasmid conjugal transfer protein4e-1789.4
NC_011985:3869998:386999838699983870930933Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB62e-1273.6
NC_014532:2664139:2708237270823727092411005Halomonas elongata DSM 2581, complete genomeTrbL/VirB6 plasmid conjugal transfer protein1e-0758.2
NC_015379:6226661:6236400623640062374521053Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative type IV secretion system protein virB64e-0756.2
NC_010645:369408:3851343851343861861053Bordetella avium 197N, complete genomeconjugal transfer protein7e-0755.5
NC_002927:506183:5190955190955201471053Bordetella bronchiseptica RB50, complete genomeplasmid-related membrane protein3e-0653.1
NC_010170:3908500:392072539207253921675951Bordetella petrii, complete genometype IV secretion system protein VirB69e-0651.6