Pre_GI: BLASTP Hits

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Query: NC_008530:1775841:1779653 Lactobacillus gasseri ATCC 33323, complete genome

Start: 1779653, End: 1780015, Length: 363

Host Lineage: Lactobacillus gasseri; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Lactobacillus gasseri ATCC 33323 is a human isolate and is the type strain. This organism has been shown to have probiotic activities such as production of bacteriocins, macrophage stimulation and adherence to intestinal tissues. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus gasseri is a rod-shaped, gram-positive anaerobe. Of the lactobacilli, it is the most amenable to DNA introduction and manipulation which should prove useful in the functional genomic analysis of this species. It has been shown to be an effective probiotic in suppressing Helicobacter pylori infections in humans.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005362:1870620:187585018758501876212363Lactobacillus johnsonii NCC 533, complete genomehypothetical protein4e-63239
NC_013504:1648551:165484116548411655203363Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein1e-62238
NC_014106:419511:453485453485453853369Lactobacillus crispatus ST1, complete genomeManO1e-42171
NC_015602:1339067:134388913438891344257369Lactobacillus kefiranofaciens ZW3 chromosome, complete genomehypothetical protein7e-42169
NC_018528:1681060:168695916869591687327369Lactobacillus helveticus R0052 chromosome, complete genomehypothetical protein7e-42168
NC_006814:403723:442289442289442657369Lactobacillus acidophilus NCFM, complete genomehypothetical protein3e-41166
NC_014724:439594:478031478031478399369Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein2e-40164
NC_015214:437733:477646477646478014369Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein2e-40164
NC_008261:967973:972063972063972437375Clostridium perfringens ATCC 13124, complete genomehypothetical protein3e-29126
NC_015975:1936504:194992519499251950305381Lactobacillus ruminis ATCC 27782 chromosome, complete genomehypothetical protein2e-27120
NC_011660:2509362:251589025158902516279390Listeria monocytogenes HCC23 chromosome, complete genomehypothetical protein7e-25112
NC_013171:228356:229294229294229641348Anaerococcus prevotii DSM 20548, complete genomeprotein of unknown function DUF9569e-24108
NC_013192:469771:483062483062483439378Leptotrichia buccalis DSM 1135, complete genomehypothetical protein1e-1478.6