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Query: NC_008526:74500 Lactobacillus casei ATCC 334, complete genome

Start: 74500, End: 116504, Length: 42005

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014334:99000*9900012029021291Lactobacillus casei str. Zhang chromosome, complete genome017440BLASTN svgBLASTP svg
NC_010999:21557142155714218202826315Lactobacillus casei, complete genome03029BLASTN svgBLASTP svg
NC_010999:34925234925236774518494Lactobacillus casei, complete genome03003BLASTN svgBLASTP svg
NC_008526:23731902373190239665623467Lactobacillus casei ATCC 334, complete genome02274BLASTN svgBLASTP svg
NC_013198:394000*39400046795873959Lactobacillus rhamnosus GG, complete genome02268BLASTN svgBLASTP svg
NC_008526:19735001973500199344619947Lactobacillus casei ATCC 334, complete genome02252BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome02228BLASTN svgBLASTP svg
NC_008526:50626350626352818721925Lactobacillus casei ATCC 334, complete genome02224BLASTN svgBLASTP svg
NC_014334:58952658952661259823073Lactobacillus casei str. Zhang chromosome, complete genome1e-49206BLASTN svgBLASTP svg
NC_010999:2450974*2450974247597425001Lactobacillus casei, complete genome3e-41178BLASTN svgBLASTP svg
NC_013199:11500001150000117399223993Lactobacillus rhamnosus Lc 705, complete genome3e-26129BLASTN svgBLASTP svg
NC_008526:250000*25000027159921600Lactobacillus casei ATCC 334, complete genome1e-22117BLASTN svgBLASTP svg
NC_015634:3017564*3017564305008732524Bacillus coagulans 2-6 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007168:16431*164313433517905Staphylococcus haemolyticus JCSC1435, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_002976:2580485*2580485260359923115Staphylococcus epidermidis RP62A, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_004461:1*14406944069Staphylococcus epidermidis ATCC 12228, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008526:1822000*1822000184089018891Lactobacillus casei ATCC 334, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010999:24830002483000250109918100Lactobacillus casei, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013198:51179551179553527023476Lactobacillus rhamnosus GG, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010999:25160002516000253888722888Lactobacillus casei, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009004:1770497*1770497179533924843Lactococcus lactis subsp. cremoris MG1363, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_002952:15405*154053571720313Staphylococcus aureus subsp. aureus MRSA252, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002951:15441*154413566720227Staphylococcus aureus subsp. aureus COL, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002758:16000*160003359917600Staphylococcus aureus subsp. aureus Mu50, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_002745:16000*160003710921110Staphylococcus aureus subsp. aureus N315, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007622:16000*160003563419635Staphylococcus aureus RF122, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007793:15441*154413576920329Staphylococcus aureus subsp. aureus USA300, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_007795:15414*154143645721044Staphylococcus aureus subsp. aureus NCTC 8325, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_009782:16000*160003711021111Staphylococcus aureus subsp. aureus Mu3, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010079:15441*154413576920329Staphylococcus aureus subsp. aureus USA300_TCH1516, complete1e-0663.9BLASTN svgBLASTP svg
NC_013198:36829368295752920701Lactobacillus rhamnosus GG, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014334:1775781*1775781179812122341Lactobacillus casei str. Zhang chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010999:1979989*1979989200135021362Lactobacillus casei, complete genome5e-0661.9BLASTN svgBLASTP svg