Query: NC_008463:3168837 Pseudomonas aeruginosa UCBPP-PA14, complete genome
Start: 3168837, End: 3198149, Length: 29313
Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_002516:2436304 | 2436304 | 2465099 | 28796 | Pseudomonas aeruginosa PAO1, complete genome | 0 | 11160 | BLASTN svg | BLASTP svg |
NC_011770:3396637 | 3396637 | 3419544 | 22908 | Pseudomonas aeruginosa LESB58, complete genome | 0 | 9997 | BLASTN svg | BLASTP svg |
NC_009439:2427120* | 2427120 | 2481163 | 54044 | Pseudomonas mendocina ymp, complete genome | 2e-63 | 252 | BLASTN svg | BLASTP svg |
NC_020209:1949500 | 1949500 | 1976529 | 27030 | Pseudomonas poae RE*1-1-14, complete genome | 3e-56 | 228 | BLASTN svg | BLASTP svg |
NC_011662:2374955 | 2374955 | 2393507 | 18553 | Thauera sp. MZ1T, complete genome | 1e-52 | 216 | BLASTN svg | BLASTP svg |
NC_007492:1193626 | 1193626 | 1216997 | 23372 | Pseudomonas fluorescens PfO-1, complete genome | 1e-48 | 202 | BLASTN svg | BLASTP svg |
NC_015410:2698572 | 2698572 | 2744636 | 46065 | Pseudomonas mendocina NK-01 chromosome, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
NC_007434:2290934 | 2290934 | 2312090 | 21157 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 2e-38 | 168 | BLASTN svg | BLASTP svg |
NC_008463:4342119 | 4342119 | 4369203 | 27085 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 2e-32 | 149 | BLASTN svg | BLASTP svg |
NC_002516:776787 | 776787 | 802239 | 25453 | Pseudomonas aeruginosa PAO1, complete genome | 3e-31 | 145 | BLASTN svg | BLASTP svg |
NC_004578:20738 | 20738 | 69606 | 48869 | Pseudomonas syringae pv. tomato str. DC3000, complete genome | 1e-30 | 143 | BLASTN svg | BLASTP svg |
NC_008463:1912348* | 1912348 | 1954182 | 41835 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 7e-26 | 127 | BLASTN svg | BLASTP svg |
NC_013421:1954915* | 1954915 | 1974100 | 19186 | Pectobacterium wasabiae WPP163, complete genome | 2e-23 | 119 | BLASTN svg | BLASTP svg |
NC_015740:1291739 | 1291739 | 1315296 | 23558 | Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete | 7e-23 | 117 | BLASTN svg | BLASTP svg |
NC_020063:2343813 | 2343813 | 2366099 | 22287 | Enterobacteriaceae bacterium strain FGI 57, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
NC_013093:2230171* | 2230171 | 2254980 | 24810 | Actinosynnema mirum DSM 43827, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_007510:3340008 | 3340008 | 3375417 | 35410 | Burkholderia sp. 383 chromosome 1, complete sequence | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009668:46010 | 46010 | 65599 | 19590 | Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_009664:1434974* | 1434974 | 1457886 | 22913 | Kineococcus radiotolerans SRS30216, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008314:1465643* | 1465643 | 1515981 | 50339 | Ralstonia eutropha H16 chromosome 2, complete sequence | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_013169:2045000 | 2045000 | 2065599 | 20600 | Kytococcus sedentarius DSM 20547, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015145:1045264 | 1045264 | 1084252 | 38989 | Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_012856:2633890 | 2633890 | 2662237 | 28348 | Ralstonia pickettii 12D chromosome 1, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007510:1959883 | 1959883 | 2018034 | 58152 | Burkholderia sp. 383 chromosome 1, complete sequence | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_004129:5723787* | 5723787 | 5758179 | 34393 | Pseudomonas fluorescens Pf-5, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |