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Query: NC_008463:3168837 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 3168837, End: 3198149, Length: 29313

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:24363042436304246509928796Pseudomonas aeruginosa PAO1, complete genome011160BLASTN svgBLASTP svg
NC_011770:33966373396637341954422908Pseudomonas aeruginosa LESB58, complete genome09997BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome2e-63252BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome3e-56228BLASTN svgBLASTP svg
NC_011662:23749552374955239350718553Thauera sp. MZ1T, complete genome1e-52216BLASTN svgBLASTP svg
NC_007492:11936261193626121699723372Pseudomonas fluorescens PfO-1, complete genome1e-48202BLASTN svgBLASTP svg
NC_015410:26985722698572274463646065Pseudomonas mendocina NK-01 chromosome, complete genome1e-42182BLASTN svgBLASTP svg
NC_007434:22909342290934231209021157Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-38168BLASTN svgBLASTP svg
NC_008463:43421194342119436920327085Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-32149BLASTN svgBLASTP svg
NC_002516:77678777678780223925453Pseudomonas aeruginosa PAO1, complete genome3e-31145BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-30143BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome7e-26127BLASTN svgBLASTP svg
NC_013421:1954915*1954915197410019186Pectobacterium wasabiae WPP163, complete genome2e-23119BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-23117BLASTN svgBLASTP svg
NC_020063:23438132343813236609922287Enterobacteriaceae bacterium strain FGI 57, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013093:2230171*2230171225498024810Actinosynnema mirum DSM 43827, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007510:33400083340008337541735410Burkholderia sp. 383 chromosome 1, complete sequence2e-1489.7BLASTN svgBLASTP svg
NC_009668:46010460106559919590Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence6e-1487.7BLASTN svgBLASTP svg
NC_009664:1434974*1434974145788622913Kineococcus radiotolerans SRS30216, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_008314:1465643*1465643151598150339Ralstonia eutropha H16 chromosome 2, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_013169:20450002045000206559920600Kytococcus sedentarius DSM 20547, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015145:10452641045264108425238989Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_012856:26338902633890266223728348Ralstonia pickettii 12D chromosome 1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_007510:19598831959883201803458152Burkholderia sp. 383 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_004129:5723787*5723787575817934393Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg