Pre_GI: BLASTN Hits

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Query: NC_008278:2594387 Frankia alni ACN14a, complete genome

Start: 2594387, End: 2613629, Length: 19243

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009921:16111321611132163853427403Frankia sp. EAN1pec, complete genome1e-32149BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_014666:5449884*5449884547207422191Frankia sp. EuI1c chromosome, complete genome7e-25123BLASTN svgBLASTP svg
NC_014323:24597924597926763821660Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015733:3923800*3923800394679722998Pseudomonas putida S16 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008786:3323167*3323167337505651890Verminephrobacter eiseniae EF01-2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_005773:26417152641715266373322019Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_015138:27250027250029566023161Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_009439:4661102*4661102468191020809Pseudomonas mendocina ymp, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome9e-0660BLASTN svgBLASTP svg