Query: NC_008278:2594387 Frankia alni ACN14a, complete genome
Start: 2594387, End: 2613629, Length: 19243
Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_009921:1611132 | 1611132 | 1638534 | 27403 | Frankia sp. EAN1pec, complete genome | 1e-32 | 149 | BLASTN svg | BLASTP svg |
NC_015656:2484749* | 2484749 | 2515484 | 30736 | Frankia symbiont of Datisca glomerata chromosome, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_014666:5449884* | 5449884 | 5472074 | 22191 | Frankia sp. EuI1c chromosome, complete genome | 7e-25 | 123 | BLASTN svg | BLASTP svg |
NC_014323:245979 | 245979 | 267638 | 21660 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_013947:613774* | 613774 | 633827 | 20054 | Stackebrandtia nassauensis DSM 44728 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_015733:3923800* | 3923800 | 3946797 | 22998 | Pseudomonas putida S16 chromosome, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_012856:1 | 1 | 22963 | 22963 | Ralstonia pickettii 12D chromosome 1, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_008786:3323167* | 3323167 | 3375056 | 51890 | Verminephrobacter eiseniae EF01-2, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002947:5386489 | 5386489 | 5414167 | 27679 | Pseudomonas putida KT2440, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008786:1767315 | 1767315 | 1790530 | 23216 | Verminephrobacter eiseniae EF01-2, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_008786:1332041 | 1332041 | 1355778 | 23738 | Verminephrobacter eiseniae EF01-2, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_005773:2641715 | 2641715 | 2663733 | 22019 | Pseudomonas syringae pv. phaseolicola 1448A, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015138:272500 | 272500 | 295660 | 23161 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009439:4661102* | 4661102 | 4681910 | 20809 | Pseudomonas mendocina ymp, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002947:4994335 | 4994335 | 5049356 | 55022 | Pseudomonas putida KT2440, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |