Pre_GI: BLASTP Hits

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Query: NC_008278:2813362:2822914 Frankia alni ACN14a, complete genome

Start: 2822914, End: 2823243, Length: 330

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015690:790500:804304804304804633330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator3e-48189
NC_016935:789849:805610805610805939330Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator8e-48188
NC_015690:2039215:204633620463362046665330Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator2e-31134
NC_004193:375416:420145420145420480336Oceanobacillus iheyensis HTE831, complete genomehypothetical protein6e-30129
NC_016935:2567039:259505025950502595394345Paenibacillus mucilaginosus 3016 chromosome, complete genomePadR-like family transcriptional regulator2e-24111
NC_014330:1010000:101901510190151019344330Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative transcriptional regulator3e-24110
NC_019908:2183215:219799821979982198327330Brachyspira pilosicoli P43/6/78 chromosome, complete genometranscriptional regulator6e-24109
NC_012673:785718:792796792796793152357Exiguobacterium sp. AT1b, complete genometranscriptional regulator, PadR-like family6e-2199.4
NC_003366:863437:878020878020878352333Clostridium perfringens str. 13, complete genome30S ribosomal protein homolog7e-1992.4
NC_008261:817295:834077834077834409333Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, PadR family5e-1889.7
NC_014328:3747973:375165537516553751996342Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative PadR family transcriptional regulator7e-1889.4
NC_015690:6595395:660345166034516603786336Paenibacillus mucilaginosus KNP414 chromosome, complete genomePadR-like family transcriptional regulator3e-1787.4
NC_014393:4612301:463298446329844633328345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family3e-1684
NC_014393:4352216:437518143751814375525345Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, PadR-like family1e-1582
NC_019897:700332:733396733396733758363Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator4e-1580.1
NC_012778:364728:368015368015368353339Eubacterium eligens ATCC 27750, complete genomehypothetical protein3e-1477.4
NC_015589:814530:827671827671828009339Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator PadR family protein1e-1374.7
NC_018664:2638102:264078026407802641118339Clostridium acidurici 9a chromosome, complete genometranscriptional regulator, PadR family2e-1374.7
NC_014171:1018338:102901910290191029351333Bacillus thuringiensis BMB171 chromosome, complete genomePadR family transcriptional regulator3e-1167.4
NC_004722:1008500:101926110192611019602342Bacillus cereus ATCC 14579, complete genomeTranscriptional regulator, PadR family3e-1167
NC_017208:1050414:106205310620531062385333Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePadR family transcriptional regulator4e-1167
NC_011725:1032500:104332810433281043660333Bacillus cereus B4264 chromosome, complete genomePadR family transcriptional regulator4e-1167
NC_012483:996555:101723810172381017600363Acidobacterium capsulatum ATCC 51196, complete genometranscriptional regulator, PadR family6e-1166.2
NC_013730:4573077:459200745920074592351345Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family1e-1065.1
NC_010184:1017000:102748510274851027817333Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family2e-1064.7
NC_013665:1766158:179097717909771791321345Methanocella paludicola SANAE, complete genomeputative PadR-like family transcriptional regulator2e-1064.3
NC_007907:4956500:496671849667184967065348Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-1063.5
NC_011830:1037520:105271710527171053064348Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, PadR-like family6e-1062.8
NC_009328:293000:348394348394348717324Geobacillus thermodenitrificans NG80-2 chromosome, complete genometranscriptional regulator9e-1062.4
NC_015275:1480500:149883014988301499192363Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, PadR-like family1e-0962
NC_007644:2452244:246911124691112469470360Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, PadR-like family1e-0961.6
NC_006348:2738425:275557927555792755920342Burkholderia mallei ATCC 23344 chromosome 1, complete sequencetranscriptional regulator, PadR family2e-0960.8
NC_009464:931647:932620932620932970351Uncultured methanogenic archaeon RC-I, complete genomeputative transcription regulator (PadR family)4e-0960.1
NC_014323:3976351:401955840195584019887330Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein6e-0959.7
NC_009712:334143:337653337653337979327Candidatus Methanoregula boonei 6A8, complete genomePadR-like family transcriptional regulator3e-0857.4
NC_017059:1727095:173115517311551731733579Rhodospirillum photometricum DSM 122, complete genomePadR family transcriptional regulator5e-0856.6
NC_013730:2751484:278794927879492788323375Spirosoma linguale DSM 74, complete genometranscriptional regulator, PadR-like family5e-0856.2
NC_013037:6209424:621816562181656218518354Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, PadR-like family1e-0755.5
NC_015514:3351052:337177733717773372106330Cellulomonas fimi ATCC 484 chromosome, complete genomePadR-like family transcriptional regulator4e-0753.5
NC_014624:828943:843139843139843462324Eubacterium limosum KIST612 chromosome, complete genometranscription regulator (putative)5e-0753.1
NC_016048:2343500:235035923503592350718360Oscillibacter valericigenes Sjm18-20, complete genomeputative PadR family transcriptional regulator6e-0752.8
NC_013739:2057781:207558820755882075941354Conexibacter woesei DSM 14684, complete genometranscriptional regulator, PadR-like family1e-0652
NC_018704:1424728:142569314256931426040348Amphibacillus xylanus NBRC 15112, complete genomeputative PadR family transcriptional regulator1e-0651.6
NC_009033:755226:756710756710757102393Staphylothermus marinus F1, complete genometranscriptional regulator, PadR-like family2e-0651.2
NC_005957:4472800:447576544757654476109345Bacillus thuringiensis serovar konkukian str. 97-27, completepossible transcriptional regulator, PadR family3e-0650.4
NC_014963:4416339:442588144258814426225345Terriglobus saanensis SP1PR4 chromosome, complete genomePadR family transcriptional regulator3e-0650.4
NC_014210:3817948:382363438236343824467834Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, PadR-like family4e-0650.1
NC_010184:4497473:450447345044734504817345Bacillus weihenstephanensis KBAB4, complete genometranscriptional regulator, PadR-like family5e-0649.7