Pre_GI: BLASTP Hits

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Query: NC_008228:776000:790563 Pseudoalteromonas atlantica T6c, complete genome

Start: 790563, End: 790808, Length: 246

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:894955:926514926514926783270Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-1375.1
NC_011147:2713937:271504927150492715318270Salmonella enterica subsp. enterica serovar Paratyphi A strphage protein1e-1375.1
NC_011080:2870428:287042828704282870697270Salmonella enterica subsp. enterica serovar Newport str. SL254,zinc-finger protein1e-1375.1
NC_006511:2718401:271951327195132719782270Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative phage gene1e-1375.1
NC_008750:3314309:333101033310103331258249Shewanella sp. W3-18-1, complete genomephage transcriptional activator, Ogr/delta2e-1374.7
NC_009348:4135002:414252641425264142777252Aeromonas salmonicida subsp. salmonicida A449, complete genomephage protein6e-1372.8
NC_014500:894136:926246926246926566321Dickeya dadantii 3937 chromosome, complete genomebacteriophage transcription regulator protein9e-1372.4
NC_013592:804288:826946826946827212267Dickeya dadantii Ech586, complete genometranscriptional activator Ogr/delta8e-1372.4
NC_008570:2216736:226622122662212266472252Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomephage transcriptional activator, Ogr/Delta, putative8e-1372.4
NC_009784:253852:270820270820271071252Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein4e-1270.1
NC_007645:6858465:687782168778216878084264Hahella chejuensis KCTC 2396, complete genomehypothetical protein1e-1168.6
NC_013892:992811:995333995333995599267Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein6e-1166.2
NC_015061:2770856:277464827746482774962315Rahnella sp. Y9602 chromosome, complete genometranscriptional activator Ogr/delta1e-1065.1
NC_008751:1762562:176916017691601769399240Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage transcriptional activator, Ogr/delta4e-1063.5
NC_015224:3291736:330569933056993306046348Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,Phage transcriptional activator, Ogr/delta5e-1063.2
NC_009778:2951207:296715029671502967422273Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0960.5
NC_008751:3214000:321974332197433219985243Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomephage transcriptional activator, Ogr/delta1e-0755.5