Pre_GI: BLASTP Hits

Some Help

Query: NC_008120:62000:62072 Yersinia pestis Antiqua plasmid pMT, complete sequence

Start: 62072, End: 63958, Length: 1887

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009378:62215:6725267252696182367Yersinia pestis Pestoides F plasmid MT, complete sequenceporphyrin biosynthetic protein0923
NC_008118:56777:6181461814641802367Yersinia pestis Nepal516 plasmid pMT, complete sequenceporphyrin biosynthetic protein0923
NC_005815:61148:6814468144705102367Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative porphyrin biosynthetic protein0923
NC_004838:51013:8507585075874412367Yersinia pestis KIM plasmid pMT-1, complete sequenceputative porphyrin biosynthetic enzyme0923
NC_007205:424500:4445714445714463791809Candidatus Pelagibacter ubique HTCC1062, complete genomeCobalamin biosynthesis protein CobT1e-1998.6
NC_009505:1928000:1951921195192119538341914Brucella ovis ATCC 25840 chromosome I, complete sequencecobaltochelatase subunit CobT2e-1998.2
NC_007952:1934249:1935202193520219369561755Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative cobalamin biosynthesis protein cobT4e-1997.1
NC_010338:4481356:4496669449666944986121944Caulobacter sp. K31, complete genomecobalt chelatase, pCobT subunit6e-1996.3
NC_007493:546000:5668985668985687571860Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceaerobic cobalt chelatase, CobT subunit6e-1789.7
NC_008011:213386:2347552347552363471593Lawsonia intracellularis PHE/MN1-00, complete genomehypothetical protein5e-0963.2
NC_015572:4063150:4094877409487740966251749Methylomonas methanica MC09 chromosome, complete genomeCobaltochelatase6e-0963.2
NC_002937:2068117:2120862212086221224631602Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein7e-0859.7
NC_013173:1356526:1399472139947214012711800Desulfomicrobium baculatum DSM 4028, complete genomeCobalamin biosynthesis protein CobT (nicotinate- mononucleotide:5 6-dimethylbenzimidazole phosphoribosyltransferase)-like protein3e-0757.4
NC_009089:370555:3891073891073908791773Clostridium difficile 630, complete genomehypothetical protein4e-0757
NC_013316:371953:3905053905053922771773Clostridium difficile R20291, complete genomehypothetical protein4e-0757
NC_008609:1976403:2040956204095620425121557Pelobacter propionicus DSM 2379, complete genomevon Willebrand factor, type A6e-0756.2