Pre_GI: BLASTN Hits

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Query: NC_007925:4060635 Rhodopseudomonas palustris BisB18, complete genome

Start: 4060635, End: 4088224, Length: 27590

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009720:12488661248866127253723672Xanthobacter autotrophicus Py2, complete genome4e-92347BLASTN svgBLASTP svg
NC_009720:2143124*2143124216762924506Xanthobacter autotrophicus Py2, complete genome1e-18103BLASTN svgBLASTP svg
NC_003911:25404532540453256752127069Silicibacter pomeroyi DSS-3, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_012587:12884512884515159922755Rhizobium sp. NGR234, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_013855:1268424*1268424129242324000Azospirillum sp. B510 plasmid pAB510a, complete sequence4e-1591.7BLASTN svgBLASTP svg
NC_007508:47657514765751478898723237Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015711:4957053*4957053498749830446Myxococcus fulvus HW-1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014034:10366521036652106561128960Rhodobacter capsulatus SB1003 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_011894:67089706708970672882019851Methylobacterium nodulans ORS 2060, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_010172:57304657304660029627251Methylobacterium extorquens PA1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007333:3626510*3626510365399927490Thermobifida fusca YX, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007333:111820218202Thermobifida fusca YX, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_013521:4240468*4240468426799927532Sanguibacter keddieii DSM 10542, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014830:4012999*4012999403999927001Intrasporangium calvum DSM 43043 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014355:399938*39993841891618979Candidatus Nitrospira defluvii, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014318:369136912533921649Amycolatopsis mediterranei U32 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012522:75960397596039763616240124Rhodococcus opacus B4, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013093:111124311243Actinosynnema mirum DSM 43827, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_013595:10329633*103296331035599926367Streptosporangium roseum DSM 43021, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014323:43552664355266437857423309Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011886:4376261*4376261440799931739Arthrobacter chlorophenolicus A6, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014151:4106624*4106624413399927376Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019962:49200049200051353621537Natrinema pellirubrum DSM 15624, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-0867.9BLASTN svgBLASTP svg
NC_014158:16513261651326167532524000Tsukamurella paurometabola DSM 20162 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013510:1*11865618656Thermomonospora curvata DSM 43183, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013722:2150882*2150882218450433623Xanthomonas albilineans, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014210:5752651*5752651577999927349Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_015711:8852850*8852850887609923250Myxococcus fulvus HW-1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018750:3964784*3964784398396119178Streptomyces venezuelae ATCC 10712, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015387:10029551002955103001227058Marinithermus hydrothermalis DSM 14884 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007626:4135961*4135961417095634996Magnetospirillum magneticum AMB-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007517:25158702515870254324527376Geobacter metallireducens GS-15, complete genome3e-0661.9BLASTN svgBLASTP svg