Pre_GI: BLASTP Hits

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Query: NC_006905:2630000:2632232 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 2632232, End: 2634298, Length: 2067

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013282:3216226:3216226321622632182862061Cronobacter turicensis, complete genomePolyphosphate kinase01308
NC_020063:1194000:1211475121147512135352061Enterobacteriaceae bacterium strain FGI 57, complete genomepolyphosphate kinase 101304
NC_020181:5384015:5405781540578154078412061Enterobacter aerogenes EA1509E, complete genomePolyphosphate kinase01297
NC_011283:1307173:1328363132836313304232061Klebsiella pneumoniae 342 chromosome, complete genomepolyphosphate kinase01289
NC_012880:3125261:3127666312766631297352070Dickeya dadantii Ech703, complete genomePolyphosphate kinase01132
NC_009052:2107692:2127611212761121297822172Shewanella baltica OS155, complete genomePolyphosphate kinase0748
NC_015144:2053969:2066661206666120687242064Weeksella virosa DSM 16922 chromosome, complete genomepolyphosphate kinase 14e-150532
NC_016001:1893685:1893685189368518957812097Flavobacterium branchiophilum, complete genomepolyphosphate kinase2e-146520
NC_003228:3085793:3107859310785931099252067Bacteroides fragilis NCTC 9343, complete genomepolyphosphate kinase4e-144512
NC_015510:6373937:6399422639942264014612040Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomepolyphosphate kinase 18e-136484
NC_013132:1689172:1689172168917216912352064Chitinophaga pinensis DSM 2588, complete genomePolyphosphate kinase2e-119430
NC_004663:2509433:2532821253282125348992079Bacteroides thetaiotaomicron VPI-5482, complete genomepolyphosphate kinase5e-119428
NC_002950:1981155:1981155198115519832422088Porphyromonas gingivalis W83, complete genomepolyphosphate kinase2e-118426
NC_014221:266638:2721242721242742112088Truepera radiovictrix DSM 17093 chromosome, complete genomePolyphosphate kinase1e-114414
NC_020541:2551539:2571325257132525734902166Rhodanobacter sp. 2APBS1, complete genomepolyphosphate kinase 16e-111402
NC_007604:1586243:1623449162344916256442196Synechococcus elongatus PCC 7942, complete genomePolyphosphate kinase2e-110400
NC_006576:12230:2441824418266132196Synechococcus elongatus PCC 6301, complete genomepolyphosphate kinase7e-110398
NC_009091:1598044:1614329161432916164132085Prochlorococcus marinus str. MIT 9301, complete genomeputative Polyphosphate kinase2e-108394
NC_005070:2374850:2397086239708623992242139Synechococcus sp. WH 8102, complete genomepolyphosphate kinase1e-107390
NC_008025:430487:4506824506824528622181Deinococcus geothermalis DSM 11300, complete genomePolyphosphate kinase7e-107388
NC_007404:1126756:1145225114522511472912067Thiobacillus denitrificans ATCC 25259, complete genomepolyphosphate kinase7e-105382
NC_005042:1719055:1720403172040317225142112Prochlorococcus marinus subsp. marinus str. CCMP1375, completepolyphosphate kinase5e-105382
NC_020291:4502467:4518763451876345208172055Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomepolyphosphate kinase Ppk2e-103376
NC_009719:3532587:3561695356169535639022208Parvibaculum lavamentivorans DS-1 chromosome, complete genomepolyphosphate kinase7e-103375
NC_020541:2769419:2769419276941927715122094Rhodanobacter sp. 2APBS1, complete genomepolyphosphate kinase 12e-102374
NC_014246:496976:4991104991105015842475Mobiluncus curtisii ATCC 43063 chromosome, complete genomepolyphosphate kinase3e-101369
NC_015711:2008578:2008578200857820107432166Myxococcus fulvus HW-1 chromosome, complete genomepolyphosphate kinase7e-101368
NC_013960:2366910:2383913238391323859852073Nitrosococcus halophilus Nc4 chromosome, complete genomePolyphosphate kinase8e-100365
NC_005966:1780468:1789403178940317914842082Acinetobacter sp. ADP1, complete genomepolyphosphate kinase2e-99363
NC_007973:2348481:2384501238450123865822082Ralstonia metallidurans CH34 chromosome 1, complete sequencePolyphosphate kinase2e-99363
NC_008390:1293823:1295266129526612973292064Burkholderia cepacia AMMD chromosome 1, complete sequencePolyphosphate kinase3e-97356
NC_013501:1140390:1159486115948611616752190Rhodothermus marinus DSM 4252, complete genomePolyphosphate kinase4e-94346
NC_009515:1409912:1452290145229014544312142Methanobrevibacter smithii ATCC 35061, complete genomepolyphosphate kinase3e-93343
NC_015064:2494000:2500007250000725023192313Acidobacterium sp. MP5ACTX9 chromosome, complete genomePolyphosphate kinase5e-93342
NC_019815:782987:7972627972627993402079Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneipolyphosphate kinase1e-92340
NC_009707:281000:2977632977632998472085Campylobacter jejuni subsp. doylei 269.97 chromosome, completepolyphosphate kinase3e-90333
NC_012791:2423466:2464275246427524665932319Variovorax paradoxus S110 chromosome 1, complete genomePolyphosphate kinase3e-90333
NC_014935:1999653:2024443202444320265482106Nitratifractor saLSUginis DSM 16511 chromosome, complete genomepolyphosphate kinase2e-89330
NC_015737:2050219:2051159205115920533812223Clostridium sp. SY8519, complete genomepolyphosphate kinase2e-86320
NC_019814:320260:3380453380453401502106Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonaspolyphosphate kinase6e-85315
NC_019892:6645515:6665424666542466676192196Singulisphaera acidiphila DSM 18658 chromosome, complete genomepolyphosphate kinase 13e-84313
NC_014973:1941500:1944372194437219465252154Geobacter sp. M18 chromosome, complete genomepoluphosphate kinase2e-82307
NC_014958:3393855:3398421339842134004832063Deinococcus maricopensis DSM 21211 chromosome, complete genome2e-1275.1