Pre_GI: BLASTP Hits

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Query: NC_005140:883857:889161 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 889161, End: 889472, Length: 312

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013457:140474:162597162597162908312Vibrio sp. Ex25 chromosome 2, complete genometranslation initiation factor SUI1-related protein6e-37152
NC_016628:193000:214859214859215170312Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceTranslation initiation factor 15e-30129
NC_009456:557962:567932567932568312381Vibrio cholerae O395 chromosome 1, complete sequencetranslation initiation factor Sui12e-28124
NC_012667:839318:851509851509851820312Vibrio cholerae MJ-1236 chromosome 2, complete genometranslation initiation factor Sui14e-28123
NC_012583:683887:695699695699696010312Vibrio cholerae O395 chromosome chromosome II, complete sequenceSui1 family protein4e-28123
NC_020063:2480983:250461025046102504936327Enterobacteriaceae bacterium strain FGI 57, complete genometranslation initiation factor 1 (eIF-1/SUI1)3e-25113
NC_007954:3171081:320778632077863208151366Shewanella denitrificans OS217, complete genometranslation initiation factor SUI19e-22102
NC_009092:1305355:132109213210921321421330Shewanella loihica PV-4, complete genometranslation initiation factor SUI15e-1993.2
NC_015424:2726223:272622327262232726552330Aeromonas veronii B565 chromosome, complete genometranslation initiation factor, Sui1 family-like protein1e-1581.6
NC_011146:482440:489753489753490121369Geobacter bemidjiensis Bem, complete genometranslation initiation factor SUI16e-1579.3
NC_007517:3151742:316885231688523169217366Geobacter metallireducens GS-15, complete genomehypothetical protein4e-1476.6
NC_014973:4630132:464869246486924648997306Geobacter sp. M18 chromosome, complete genometranslation initiation factor SUI12e-1271.6
NC_015740:926920:940686940686941057372Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetranslation initiation factor SUI18e-1268.9
NC_009434:1068281:108189810818981082269372Pseudomonas stutzeri A1501, complete genometranslation initiation factor SUI12e-1167.8
NC_006576:2073163:209011620901162090562447Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-0651.6
NC_007604:2213659:222646822264682226803336Synechococcus elongatus PCC 7942, complete genomeprobable translation initiation factor SUI11e-0651.6