Pre_GI: BLASTP Hits

Some Help

Query: NC_004578:6089958:6119724 Pseudomonas syringae pv. tomato str. DC3000, complete genome

Start: 6119724, End: 6120185, Length: 462

Host Lineage: Pseudomonas syringae group genomosp. 3; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: While pathogenic on Arabidopsis thaliana, it is mainly characterized as causing bacterial speck disease on tomato plants, which has a large economic impact. This organism is mainly endophytic and is a poor colonizes of plant surfaces but can multiply within the host. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007005:5825925:584015958401595840632474Pseudomonas syringae pv. syringae B728a, complete genomeGCN5-related N-acetyltransferase4e-67253
NC_005773:176885:185495185495185968474Pseudomonas syringae pv. phaseolicola 1448A, complete genomeacetyltransferase, GNAT family6e-66249
NC_020209:2119845:213276821327682133250483Pseudomonas poae RE*1-1-14, complete genomeGNAT family acetyltransferase9e-49192
NC_007492:3655545:366565836656583666140483Pseudomonas fluorescens PfO-1, complete genomeGCN5-related N-acetyltransferase6e-45179
NC_008544:55451:754737547375928456Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceGCN5-related N-acetyltransferase5e-36149
NC_008062:81338:976559765598110456Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceGCN5-related N-acetyltransferase5e-36149
NC_014118:2417838:242466024246602425097438Burkholderia sp. CCGE1002 chromosome chromosome 2, completeGCN5-related N-acetyltransferase3e-35147
NC_021177:4945878:495420349542034954655453Streptomyces fulvissimus DSM 40593, complete genomeAcetyltransferase1e-21102
NC_016114:2960989:298149129814912981955465Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeN-acetyltransferase GCN52e-1891.3
NC_004578:6089958:611882561188256118932108Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1375.5
NC_006351:2759708:279670427967042797141438Burkholderia pseudomallei K96243 chromosome 2, complete sequenceacetyltransferase (GNAT) family protein5e-0960.1
NC_015383:229036:233714233714234151438Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceacetyltransferase GNAT family protein4e-0753.5
NC_005139:1784000:191999019199901920433444Vibrio vulnificus YJ016 chromosome I, complete sequenceputative acetyltransferase2e-0652