Pre_GI: BLASTP Hits

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Query: NC_004129:1848701:1850295 Pseudomonas fluorescens Pf-5, complete genome

Start: 1850295, End: 1850795, Length: 501

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:4080937:409966840996684100165498Pseudomonas putida W619, complete genomeflagellar basal body-associated protein FliL5e-54209
NC_017986:4374979:437646443764644376961498Pseudomonas putida ND6 chromosome, complete genomeflagellar basal body-associated protein FliL4e-52203
NC_002947:4931476:495035249503524950849498Pseudomonas putida KT2440, complete genomeflagellar protein4e-52203
NC_009512:1691930:169341516934151693912498Pseudomonas putida F1, complete genomeflagellar basal body-associated protein FliL4e-52203
NC_007912:2768363:276937827693782769920543Saccharophagus degradans 2-40, complete genomeflagellar basal body-associated protein FliL7e-23106
NC_009654:3849774:387976138797613880273513Marinomonas sp. MWYL1, complete genomeflagellar basal body-associated protein FliL4e-1890.5
NC_014366:1814000:183112518311251831661537Gamma proteobacterium HdN1, complete genomeFlagellar basal body-associated protein7e-1579.7
NC_007005:321695:334005334005334412408Pseudomonas syringae pv. syringae B728a, complete genomeflagellar protein2e-1375.1
NC_015276:632206:632859632859633299441Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar basal body-associated protein FliL1e-0962.4
NC_019940:293476:297206297206297691486Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar basal body-associated protein2e-0755.1
NC_013851:3300278:331339933133993313731333Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein6e-0753.5
NC_012723:71637:872158721587715501Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceFlagellar protein FliL3e-0651.2