Pre_GI: BLASTP Hits

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Query: NC_003198:4453457:4488213 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 4488213, End: 4488638, Length: 426

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003198:4453457:44737534473753450773033978Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-67254
NC_020260:312805:335450335450335878429Cronobacter sakazakii Sp291, complete genomephage lysis timing protein LysB3e-55213
NC_012947:2898179:289817928981792898607429Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeregulatory protein4e-53206
NC_016845:1773416:179210317921031792531429Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein6e-50195
NC_007613:761234:779761779761780189429Shigella boydii Sb227, complete genomeputative regulatory protein2e-45180
NC_014837:3766426:376652637665263766954429Pantoea sp. At-9b chromosome, complete genomephage lysis regulatory protein, LysB family3e-38156
NC_014562:2871765:287176528717652872193429Pantoea vagans C9-1 chromosome, complete genomeProtein lysB3e-33140
NC_014500:3097362:310225131022513102691441Dickeya dadantii 3937 chromosome, complete genomeputative regulatory protein1e-27121
NC_012912:1701231:174418517441851744625441Dickeya zeae Ech1591, complete genomeputative phage encoded host lysis, regulatory protein5e-25112
NC_013592:1668092:168433816843381684778441Dickeya dadantii Ech586, complete genomephage lysis regulatory protein, LysB family1e-24112
NC_012880:2480000:249683824968382497287450Dickeya dadantii Ech703, complete genomeputative phage encoded host lysis, regulatory protein1e-2098.6
NC_015224:2095816:209828420982842098709426Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,phage lysin2e-1891.3
NC_020209:3262000:328168632816863282135450Pseudomonas poae RE*1-1-14, complete genomephage lysis regulatory protein, LysB family2e-1270.9
NC_020211:4598217:459779245977924598220429Serratia marcescens WW4, complete genomephage lysis regulatory protein, LysB family8e-1165.9
NC_015856:1152021:117303511730351173457423Collimonas fungivorans Ter331 chromosome, complete genomeputative lysis protein8e-0959.3
NC_017047:1551836:157367415736741574096423Rahnella aquatilis HX2 chromosome, complete genomeputative P2 LysB-like protein6e-0753.1
NC_017047:4037674:405992640599264060351426Rahnella aquatilis HX2 chromosome, complete genomephage lysis regulatory protein, LysB family6e-0752.8
NC_015061:1598920:162296216229621623405444Rahnella sp. Y9602 chromosome, complete genomephage lysis regulatory protein, LysB family1e-0652
NC_020064:871338:892007892007892420414Serratia marcescens FGI94, complete genomephage lysis regulatory protein, LysB family1e-0651.6
NC_016818:1605918:162692516269251627347423Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completephage lysis regulatory protein, LysB family2e-0651.2
NC_007963:1582089:158208915820891582556468Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein8e-0649.3