Pre_GI: BLASTP Hits

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Query: NC_003198:3126548:3136966 Salmonella enterica subsp. enterica serovar Typhi str. CT18,

Start: 3136966, End: 3137151, Length: 186

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004631:3112043:312246131224613122646186Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein8e-30129
NC_011147:3075186:308561530856153085800186Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-29126
NC_006511:3079512:308994130899413090126186Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-29126
NC_017033:2081206:208638120863812087217837Frateuria aurantia DSM 6220 chromosome, complete genomehypothetical protein4e-0650.4