Pre_GI: BLASTN Hits

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Query: NC_016830:1901488 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1901488, End: 1928065, Length: 26578

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015379:1887275*1887275191854531271Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,012070BLASTN svgBLASTP svg
NC_012660:1804610*1804610183512430515Pseudomonas fluorescens SBW25 chromosome, complete genome06484BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome05874BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome03606BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome03513BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome01933BLASTN svgBLASTP svg
NC_015410:2144387*2144387217909934713Pseudomonas mendocina NK-01 chromosome, complete genome01731BLASTN svgBLASTP svg
NC_009439:2038303*2038303206823929937Pseudomonas mendocina ymp, complete genome01663BLASTN svgBLASTP svg
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome01505BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome01465BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome1e-147531BLASTN svgBLASTP svg
NC_012997:1446037*1446037147363527599Teredinibacter turnerae T7901, complete genome2e-115424BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome3e-80307BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome1e-42182BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome2e-35159BLASTN svgBLASTP svg
NC_005139:34350034350037669433195Vibrio vulnificus YJ016 chromosome I, complete sequence4e-27131BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome6e-23117BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010524:1005355*1005355103237727023Leptothrix cholodnii SP-6, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012808:58701*587018490626206Methylobacterium extorquens AM1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002939:2844240*2844240287693932700Geobacter sulfurreducens PCA, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_007712:4067500*4067500409105923560Sodalis glossinidius str. 'morsitans', complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009654:866124*86612489071424591Marinomonas sp. MWYL1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014550:1581812*1581812167775695945Arthrobacter arilaitensis Re117, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_020302:22193782219378224609926722Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-0765.9BLASTN svgBLASTP svg
NC_015738:76030976030977964019332Eggerthella sp. YY7918, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002939:24546862454686247498020295Geobacter sulfurreducens PCA, complete genome3e-0661.9BLASTN svgBLASTP svg