Pre_GI: BLASTN Hits

Some Help

Query: NC_015957:8569721 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 8569721, End: 8592853, Length: 23133

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:20590832059083208140822326Streptomyces sp. SirexAA-E chromosome, complete genome02942BLASTN svgBLASTP svg
NC_021177:21858982185898220648120584Streptomyces fulvissimus DSM 40593, complete genome02892BLASTN svgBLASTP svg
NC_013757:3651646*3651646369128339638Geodermatophilus obscurus DSM 43160, complete genome3e-89337BLASTN svgBLASTP svg
NC_008726:39682223968222399875830537Mycobacterium vanbaalenii PYR-1, complete genome4e-76293BLASTN svgBLASTP svg
NC_015312:2278566*2278566232680848243Pseudonocardia dioxanivorans CB1190 chromosome, complete genome9e-62246BLASTN svgBLASTP svg
NC_013947:50755815075581509797822398Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-60242BLASTN svgBLASTP svg
NC_014318:2252417*2252417228159929183Amycolatopsis mediterranei U32 chromosome, complete genome2e-59238BLASTN svgBLASTP svg
NC_018681:24478712447871247939431524Nocardia brasiliensis ATCC 700358 chromosome, complete genome8e-59236BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome5e-57230BLASTN svgBLASTP svg
NC_009921:85497578549757862261572859Frankia sp. EAN1pec, complete genome2e-53218BLASTN svgBLASTP svg
NC_014924:29619702961970298516923200Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_007508:68904668904671040421359Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome6e-38167BLASTN svgBLASTP svg
NC_010943:49300249300251859925598Stenotrophomonas maltophilia K279a, complete genome3e-37165BLASTN svgBLASTP svg
NC_011071:42920442920445640627203Stenotrophomonas maltophilia R551-3, complete genome4e-36161BLASTN svgBLASTP svg
NC_010688:673454*67345470601432561Xanthomonas campestris pv. campestris, complete genome4e-36161BLASTN svgBLASTP svg
NC_020302:21905002190500220939218893Corynebacterium halotolerans YIM 70093 = DSM 44683, complete6e-35157BLASTN svgBLASTP svg
NC_015947:44446644446646432519860Burkholderia sp. JV3 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_013757:3100515*3100515312110420590Geodermatophilus obscurus DSM 43160, complete genome1e-33153BLASTN svgBLASTP svg
NC_016010:63753563753566446226928Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete1e-33153BLASTN svgBLASTP svg
NC_007953:10889331088933110876919837Burkholderia xenovorans LB400 chromosome 3, complete sequence9e-28133BLASTN svgBLASTP svg
NC_007164:77500077500079726122262Corynebacterium jeikeium K411, complete genome5e-23117BLASTN svgBLASTP svg
NC_018868:12717421271742129953427793Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014391:34456723445672346889423223Micromonospora aurantiaca ATCC 27029 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015514:39116553911655393796226308Cellulomonas fimi ATCC 484 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011002:77224377224379174119499Burkholderia cenocepacia J2315 chromosome 3, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_003155:79790507979050800260423555Streptomyces avermitilis MA-4680, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009664:43777774377777440126323487Kineococcus radiotolerans SRS30216, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008268:17486351748635177239623762Rhodococcus sp. RHA1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003888:40312994031299405409922801Streptomyces coelicolor A3(2), complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010572:45855004585500461328027781Streptomyces griseus subsp. griseus NBRC 13350, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_001263:243000*24300026750924510Deinococcus radiodurans R1 chromosome 1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008699:1067855*1067855111667748823Nocardioides sp. JS614, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014118:23696692369669239210922441Burkholderia sp. CCGE1002 chromosome chromosome 2, complete2e-0765.9BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009921:1813500*1813500184695033451Frankia sp. EAN1pec, complete genome3e-0661.9BLASTN svgBLASTP svg