Pre_GI: BLASTN Hits

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Query: NC_015957:527777 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 527777, End: 545599, Length: 17823

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome02761BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome02759BLASTN svgBLASTP svg
NC_015957:68592596859259687895419696Streptomyces violaceusniger Tu 4113 chromosome, complete genome02736BLASTN svgBLASTP svg
NC_015957:52259035225903524815322251Streptomyces violaceusniger Tu 4113 chromosome, complete genome02736BLASTN svgBLASTP svg
NC_015951:10736010736012542918070Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete02587BLASTN svgBLASTP svg
NC_014815:5888934*5888934590800519072Micromonospora sp. L5 chromosome, complete genome8e-40172BLASTN svgBLASTP svg
NC_021177:38674393867439388623218794Streptomyces fulvissimus DSM 40593, complete genome3e-36161BLASTN svgBLASTP svg
NC_013757:72998672998676859938614Geodermatophilus obscurus DSM 43160, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013757:1732747*1732747175064117895Geodermatophilus obscurus DSM 43160, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete4e-1177.8BLASTN svgBLASTP svg
NC_014666:4547873*4547873457124523373Frankia sp. EuI1c chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009142:27250002725000275437129372Saccharopolyspora erythraea NRRL 2338, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_003155:5616000*5616000564050424505Streptomyces avermitilis MA-4680, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_009142:54848835484883550966924787Saccharopolyspora erythraea NRRL 2338, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015957:8677395*8677395870777930385Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_008095:50624915062491508841725927Myxococcus xanthus DK 1622, complete genome5e-0763.9BLASTN svgBLASTP svg