Pre_GI: BLASTN Hits

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Query: NC_015957:5109902 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Start: 5109902, End: 5128268, Length: 18367

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome018070BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome02720BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome0672BLASTN svgBLASTP svg
NC_021177:11871011871013659917890Streptomyces fulvissimus DSM 40593, complete genome3e-129470BLASTN svgBLASTP svg
NC_015953:62123666212366625841846053Streptomyces sp. SirexAA-E chromosome, complete genome5e-69270BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-58234BLASTN svgBLASTP svg
NC_015656:132633*13263316991437282Frankia symbiont of Datisca glomerata chromosome, complete genome4e-57230BLASTN svgBLASTP svg
NC_015312:1*12465124651Pseudonocardia dioxanivorans CB1190 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015588:20377262037726205909921374Isoptericola variabilis 225 chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007777:4892150*4892150493295540806Frankia sp. CcI3, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_018583:953889538813461139224Gordonia sp. KTR9 plasmid pGKT3, complete sequence6e-1073.8BLASTN svgBLASTP svg
NC_019673:20513632051363214091689554Saccharothrix espanaensis DSM 44229 complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014666:33118933311893333417922287Frankia sp. EuI1c chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_003888:38170003817000385464537646Streptomyces coelicolor A3(2), complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008537:13027813027815863428357Arthrobacter sp. FB24 plasmid 1, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_010717:47877504787750482298935240Xanthomonas oryzae pv. oryzae PXO99A, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_015146:14456514456516309918535Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, complete5e-0763.9BLASTN svgBLASTP svg
NC_014666:25892272589227260927220046Frankia sp. EuI1c chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009921:41860004186000420611220113Frankia sp. EAN1pec, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome9e-0660BLASTN svgBLASTP svg