Pre_GI: BLASTN Hits

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Query: NC_015410:2144387 Pseudomonas mendocina NK-01 chromosome, complete genome

Start: 2144387, End: 2179099, Length: 34713

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocin is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009439:2038303*2038303206823929937Pseudomonas mendocina ymp, complete genome07384BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome02089BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome02077BLASTN svgBLASTP svg
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome02070BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome01963BLASTN svgBLASTP svg
NC_015379:1887275*1887275191854531271Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,01723BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome01588BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome01582BLASTN svgBLASTP svg
NC_012660:1804610*1804610183512430515Pseudomonas fluorescens SBW25 chromosome, complete genome01556BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome0666BLASTN svgBLASTP svg
NC_012997:1446037*1446037147363527599Teredinibacter turnerae T7901, complete genome7e-128466BLASTN svgBLASTP svg
NC_009434:41403624140362416039720036Pseudomonas stutzeri A1501, complete genome4e-108400BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome8e-63250BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome4e-46194BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome6e-42180BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome1e-40176BLASTN svgBLASTP svg
NC_016002:3704006*3704006373059326588Pseudogulbenkiania sp. NH8B, complete genome1e-37167BLASTN svgBLASTP svg
NC_010170:23748522374852241026935418Bordetella petrii, complete genome9e-35157BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_020063:16597951659795169109931305Enterobacteriaceae bacterium strain FGI 57, complete genome8e-23117BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome1e-21113BLASTN svgBLASTP svg
NC_012586:92209592209594950427410Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence3e-19105BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome5e-18101BLASTN svgBLASTP svg
NC_010524:1005355*1005355103237727023Leptothrix cholodnii SP-6, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_008340:2614000*2614000263940025401Alkalilimnicola ehrlichei MLHE-1, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_009720:2489003*2489003251980530803Xanthobacter autotrophicus Py2, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_013421:32794993279499331516735669Pectobacterium wasabiae WPP163, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_008314:36500365005712620627Ralstonia eutropha H16 chromosome 2, complete sequence7e-1487.7BLASTN svgBLASTP svg
NC_014121:33996853399685343519435510Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-1385.7BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008570:4594436*4594436463690342468Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015711:6522808*6522808656473541928Myxococcus fulvus HW-1 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_009348:16124416124417922017977Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012560:15645001564500159380029301Azotobacter vinelandii DJ, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_010524:67421667421670822934014Leptothrix cholodnii SP-6, complete genome7e-0867.9BLASTN svgBLASTP svg
NC_006322:36281433628143365369825556Bacillus licheniformis ATCC 14580, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012808:58701*587018490626206Methylobacterium extorquens AM1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014910:75519275519280336548174Alicycliphilus denitrificans BC chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_006270:36279743627974365450026527Bacillus licheniformis ATCC 14580, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008781:36889653688965371374824784Polaromonas naphthalenivorans CJ2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_006512:55131255131258365432343Idiomarina loihiensis L2TR, complete genome4e-0661.9BLASTN svgBLASTP svg