Query: NC_015379:4282815 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,
Start: 4282815, End: 4303751, Length: 20937
Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_020209:2119845* | 2119845 | 2144574 | 24730 | Pseudomonas poae RE*1-1-14, complete genome | 0 | 1322 | BLASTN svg | BLASTP svg |
| NC_015556:1188500 | 1188500 | 1226026 | 37527 | Pseudomonas fulva 12-X chromosome, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_015379:6714545 | 6714545 | 6742160 | 27616 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_015976:2187377* | 2187377 | 2214329 | 26953 | Sphingobium sp. SYK-6, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_007413:4278252* | 4278252 | 4303578 | 25327 | Anabaena variabilis ATCC 29413, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_014118:1528851 | 1528851 | 1551117 | 22267 | Burkholderia sp. CCGE1002 chromosome chromosome 2, complete | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_008314:1559102 | 1559102 | 1579477 | 20376 | Ralstonia eutropha H16 chromosome 2, complete sequence | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_012660:3689223* | 3689223 | 3716587 | 27365 | Pseudomonas fluorescens SBW25 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_014323:1196209 | 1196209 | 1232659 | 36451 | Herbaspirillum seropedicae SmR1 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_020211:4598217 | 4598217 | 4630620 | 32404 | Serratia marcescens WW4, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_010572:1293786 | 1293786 | 1316846 | 23061 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015379:1600715* | 1600715 | 1626824 | 26110 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |
| NC_015379:6023926 | 6023926 | 6047280 | 23355 | Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome, | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| NC_010498:2847359* | 2847359 | 2871659 | 24301 | Escherichia coli SMS-3-5, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| NC_008463:282565* | 282565 | 320736 | 38172 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| CP002516:1165726* | 1165726 | 1191300 | 25575 | Escherichia coli KO11, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |
| CP002185:2919752* | 2919752 | 2944610 | 24859 | Escherichia coli W, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |