Pre_GI: BLASTN Hits

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Query: NC_015379:1887275 Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,

Start: 1887275, End: 1918545, Length: 31271

Host Lineage: Pseudomonas brassicacearum; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas brassicacearum is a Gram-negative soil bacterium that infects the roots of Brassica napus, from which it derives its name. Based on 16S rRNA analysis, P. brassicacearum falls within the P. fluorescens group. It has also been shown to have both pathogenic and plant growth-promoting effects on tomato plants.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012660:1804610*1804610183512430515Pseudomonas fluorescens SBW25 chromosome, complete genome06266BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome05878BLASTN svgBLASTP svg
NC_004129:4993974*4993974502072326750Pseudomonas fluorescens Pf-5, complete genome03620BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome03511BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome01907BLASTN svgBLASTP svg
NC_015410:2144387*2144387217909934713Pseudomonas mendocina NK-01 chromosome, complete genome01723BLASTN svgBLASTP svg
NC_009439:2038303*2038303206823929937Pseudomonas mendocina ymp, complete genome01671BLASTN svgBLASTP svg
NC_008463:2017607*2017607204360726001Pseudomonas aeruginosa UCBPP-PA14, complete genome01497BLASTN svgBLASTP svg
NC_011770:2046490*2046490207050324014Pseudomonas aeruginosa LESB58, complete genome01457BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome8e-143515BLASTN svgBLASTP svg
NC_012997:1446037*1446037147363527599Teredinibacter turnerae T7901, complete genome2e-115424BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome8e-69270BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome2e-41178BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome4e-40174BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome5e-33151BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_008782:31674403167440322216554726Acidovorax sp. JS42, complete genome2e-26129BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome3e-25125BLASTN svgBLASTP svg
NC_006513:34865583486558351342826871Azoarcus sp. EbN1, complete genome5e-24121BLASTN svgBLASTP svg
NC_015740:25873232587323260752820206Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-23117BLASTN svgBLASTP svg
NC_015424:3112637*3112637318003367397Aeromonas veronii B565 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_012791:20529232052923208497632054Variovorax paradoxus S110 chromosome 1, complete genome1e-18103BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_005363:16043371604337164409939763Bdellovibrio bacteriovorus HD100, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_010524:1005355*1005355103237727023Leptothrix cholodnii SP-6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014313:16549016549018947823989Hyphomicrobium denitrificans ATCC 51888 chromosome, complete6e-1487.7BLASTN svgBLASTP svg
NC_012808:58701*587018490626206Methylobacterium extorquens AM1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_011757:97281*9728112674229462Methylobacterium chloromethanicum CM4, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008314:36500365005712620627Ralstonia eutropha H16 chromosome 2, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_008781:33029343302934332709924166Polaromonas naphthalenivorans CJ2, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010814:15516241551624162182670203Geobacter lovleyi SZ, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_021150:15642291564229159503430806Azotobacter vinelandii CA6, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008702:39280433928043395047222430Azoarcus sp. BH72, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_002939:2844240*2844240287693932700Geobacter sulfurreducens PCA, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008752:10259801025980106353637557Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_007512:2024880*2024880207013145252Pelodictyon luteolum DSM 273, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_007969:72608672608675476528680Psychrobacter cryohalolentis K5, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_011146:3720658*3720658375266832011Geobacter bemidjiensis Bem, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009138:11389171138917117310234186Herminiimonas arsenicoxydans, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_009831:35838563583856360600922154Shewanella sediminis HAW-EB3, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015152:27250027250029949426995Spirochaeta sp. Buddy chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_019757:47392064739206476216822963Cylindrospermum stagnale PCC 7417, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015856:940625*94062598805147427Collimonas fungivorans Ter331 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_013173:36793263679326373266253337Desulfomicrobium baculatum DSM 4028, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010170:50877425087742511517327432Bordetella petrii, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002939:24546862454686247498020295Geobacter sulfurreducens PCA, complete genome4e-0661.9BLASTN svgBLASTP svg