Pre_GI: BLASTN Hits

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Query: NC_013929:3722867 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 3722867, End: 3769898, Length: 47032

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome03495BLASTN svgBLASTP svg
NC_015957:73015467301546732710225557Streptomyces violaceusniger Tu 4113 chromosome, complete genome01019BLASTN svgBLASTP svg
NC_018750:60702606070260610109930840Streptomyces venezuelae ATCC 10712, complete genome0662BLASTN svgBLASTP svg
NC_013093:62647362647366016133689Actinosynnema mirum DSM 43827, complete genome0662BLASTN svgBLASTP svg
NC_013595:9547254*9547254957863931386Streptosporangium roseum DSM 43021, complete genome8e-107396BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome8e-39170BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-35159BLASTN svgBLASTP svg
NC_015957:51099025109902512826818367Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-35159BLASTN svgBLASTP svg
NC_003888:38931873893187391788524699Streptomyces coelicolor A3(2), complete genome3e-26129BLASTN svgBLASTP svg
NC_010572:84939468493946855999966054Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_010572:113201832018Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_003888:5790104*5790104582064330540Streptomyces coelicolor A3(2), complete genome2e-1283.8BLASTN svgBLASTP svg
NC_008596:13020001302000135784455845Mycobacterium smegmatis str. MC2 155, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_021177:11871011871013659917890Streptomyces fulvissimus DSM 40593, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_015564:28706312870631290342332793Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_015957:51365005136500515422817729Streptomyces violaceusniger Tu 4113 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg