Query: NC_013316:2033906 Clostridium difficile R20291, complete genome
Start: 2033906, End: 2115572, Length: 81667
Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria
General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_009089:478328* | 478328 | 516637 | 38310 | Clostridium difficile 630, complete genome | 0 | 16940 | BLASTN svg | BLASTP svg |
| NC_013515:715009* | 715009 | 751255 | 36247 | Streptobacillus moniliformis DSM 12112, complete genome | 0 | 14150 | BLASTN svg | BLASTP svg |
| NC_012781:700226* | 700226 | 735492 | 35267 | Eubacterium rectale ATCC 33656, complete genome | 0 | 9898 | BLASTN svg | BLASTP svg |
| NC_012781:2552723* | 2552723 | 2588304 | 35582 | Eubacterium rectale ATCC 33656, complete genome | 0 | 9898 | BLASTN svg | BLASTP svg |
| NC_009089:2150062 | 2150062 | 2174311 | 24250 | Clostridium difficile 630, complete genome | 0 | 6377 | BLASTN svg | BLASTP svg |
| NC_015977:3324000* | 3324000 | 3346440 | 22441 | Roseburia hominis A2-183 chromosome, complete genome | 0 | 5899 | BLASTN svg | BLASTP svg |
| NC_012470:1390285 | 1390285 | 1434094 | 43810 | Streptococcus equi subsp. zooepidemicus, complete genome | 0 | 4090 | BLASTN svg | BLASTP svg |
| NC_012471:719000* | 719000 | 751220 | 32221 | Streptococcus equi subsp. equi 4047, complete genome | 0 | 2785 | BLASTN svg | BLASTP svg |
| NC_009089:1283000 | 1283000 | 1324218 | 41219 | Clostridium difficile 630, complete genome | 0 | 1168 | BLASTN svg | BLASTP svg |
| NC_013895:1332832 | 1332832 | 1380099 | 47268 | Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete | 0 | 908 | BLASTN svg | BLASTP svg |
| NC_012471:1197534* | 1197534 | 1279535 | 82002 | Streptococcus equi subsp. equi 4047, complete genome | 0 | 831 | BLASTN svg | BLASTP svg |
| NC_015385:2050648* | 2050648 | 2082918 | 32271 | Treponema succinifaciens DSM 2489 chromosome, complete genome | 0 | 829 | BLASTN svg | BLASTP svg |
| NC_012470:1946968 | 1946968 | 1976116 | 29149 | Streptococcus equi subsp. zooepidemicus, complete genome | 4e-165 | 591 | BLASTN svg | BLASTP svg |
| NC_012891:1277966 | 1277966 | 1310138 | 32173 | Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1, | 1e-97 | 367 | BLASTN svg | BLASTP svg |
| NC_013164:67500 | 67500 | 88855 | 21356 | Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequence | 1e-72 | 283 | BLASTN svg | BLASTP svg |
| NC_015977:442493 | 442493 | 477805 | 35313 | Roseburia hominis A2-183 chromosome, complete genome | 3e-70 | 276 | BLASTN svg | BLASTP svg |
| NC_007296:1073784* | 1073784 | 1096968 | 23185 | Streptococcus pyogenes MGAS6180, complete genome | 6e-47 | 198 | BLASTN svg | BLASTP svg |
| NC_014218:882118 | 882118 | 908724 | 26607 | Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome | 6e-47 | 198 | BLASTN svg | BLASTP svg |
| NC_021184:1024305* | 1024305 | 1042111 | 17807 | Desulfotomaculum gibsoniae DSM 7213, complete genome | 5e-29 | 139 | BLASTN svg | BLASTP svg |
| NC_019949:722829 | 722829 | 746262 | 23434 | Mycoplasma cynos C142 complete genome | 1e-17 | 101 | BLASTN svg | BLASTP svg |
| NC_013192:1033177 | 1033177 | 1056647 | 23471 | Leptotrichia buccalis DSM 1135, complete genome | 7e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_014246:1991093* | 1991093 | 2019860 | 28768 | Mobiluncus curtisii ATCC 43063 chromosome, complete genome | 4e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_015977:3424178* | 3424178 | 3530311 | 106134 | Roseburia hominis A2-183 chromosome, complete genome | 1e-11 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015278:176508 | 176508 | 194217 | 17710 | Aerococcus urinae ACS-120-V-Col10a chromosome, complete genome | 1e-11 | 81.8 | BLASTN svg | BLASTP svg |
| NC_016048:751000* | 751000 | 785293 | 34294 | Oscillibacter valericigenes Sjm18-20, complete genome | 4e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_009089:370555* | 370555 | 394099 | 23545 | Clostridium difficile 630, complete genome | 3e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_018867:121512 | 121512 | 151850 | 30339 | Dehalobacter sp. CF chromosome, complete genome | 3e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_018867:10238* | 10238 | 72083 | 61846 | Dehalobacter sp. CF chromosome, complete genome | 1e-08 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015977:2874000* | 2874000 | 2906496 | 32497 | Roseburia hominis A2-183 chromosome, complete genome | 2e-07 | 67.9 | BLASTN svg | BLASTP svg |
| NC_013316:371953* | 371953 | 395328 | 23376 | Clostridium difficile R20291, complete genome | 2e-07 | 67.9 | BLASTN svg | BLASTP svg |
| NC_018681:7624000* | 7624000 | 7647484 | 23485 | Nocardia brasiliensis ATCC 700358 chromosome, complete genome | 2e-06 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015214:1853106 | 1853106 | 1880099 | 26994 | Lactobacillus acidophilus 30SC chromosome, complete genome | 1e-05 | 61.9 | BLASTN svg | BLASTP svg |
| NC_014828:541874* | 541874 | 594797 | 52924 | Ethanoligenens harbinense YUAN-3 chromosome, complete genome | 1e-05 | 61.9 | BLASTN svg | BLASTP svg |