Pre_GI: BLASTN Hits

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Query: NC_013315:1679000 Clostridium difficile CD196 chromosome, complete genome

Start: 1679000, End: 1697515, Length: 18516

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from a single patient with pseudomembranous colitis in a Paris hospital in 1985. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009089:10938321093832111768023849Clostridium difficile 630, complete genome03281BLASTN svgBLASTP svg
NC_012563:2680246*2680246272077540530Clostridium botulinum A2 str. Kyoto, complete genome4e-60240BLASTN svgBLASTP svg
NC_014393:93700093700097266735668Clostridium cellulovorans 743B chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_021182:554000*55400058588731888Clostridium pasteurianum BC1, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_015913:11796611796615176933804Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_010079:15643271564327160887644550Staphylococcus aureus subsp. aureus USA300_TCH1516, complete6e-1073.8BLASTN svgBLASTP svg
NC_007793:15744561574456159486920414Staphylococcus aureus subsp. aureus USA300, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_010516:2676746*2676746271365836913Clostridium botulinum B1 str. Okra, complete genome1e-0765.9BLASTN svgBLASTP svg