Query: NC_012962:484899 Photorhabdus asymbiotica, complete genome
Start: 484899, End: 515206, Length: 30308
Host Lineage: Photorhabdus asymbiotica; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria
General Information: This strain is a North American clinical isolate from human blood. Photorhabdus asymbiota, formerly Xenorhabdus luminescens, has been isolated from human wound and blood infections often in association with spider bites. This species can also be isolated from the entomopathogenic nematode Heterorhabditis indica. Photorhabdus asymbiota is divided into two subspecies, subsp. australis which contains the Australian clinical isolates and subsp. asymbiota which contains the North American isolates. Photorhabdus is currently subdivided into three species, luminescens, temperate and asymbiotica all of which have been isolated as symbionts of heterorhabditid nematodes. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012962:3499900 | 3499900 | 3558715 | 58816 | Photorhabdus asymbiotica, complete genome | 0 | 16520 | BLASTN svg | BLASTP svg |
NC_012962:3864000* | 3864000 | 3892214 | 28215 | Photorhabdus asymbiotica, complete genome | 0 | 15650 | BLASTN svg | BLASTP svg |
NC_012962:1661683 | 1661683 | 1713905 | 52223 | Photorhabdus asymbiotica, complete genome | 0 | 15020 | BLASTN svg | BLASTP svg |
NC_012962:2587756 | 2587756 | 2639451 | 51696 | Photorhabdus asymbiotica, complete genome | 0 | 14950 | BLASTN svg | BLASTP svg |
NC_005126:4333767 | 4333767 | 4395099 | 61333 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 0 | 3612 | BLASTN svg | BLASTP svg |
NC_005126:1613818 | 1613818 | 1651438 | 37621 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 0 | 3483 | BLASTN svg | BLASTP svg |
NC_005126:1315474 | 1315474 | 1351501 | 36028 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 0 | 2759 | BLASTN svg | BLASTP svg |
NC_012962:3933715 | 3933715 | 3985425 | 51711 | Photorhabdus asymbiotica, complete genome | 5e-141 | 509 | BLASTN svg | BLASTP svg |
NC_013421:2720500 | 2720500 | 2748980 | 28481 | Pectobacterium wasabiae WPP163, complete genome | 3e-68 | 268 | BLASTN svg | BLASTP svg |
NC_005126:1265071 | 1265071 | 1318800 | 53730 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 3e-56 | 228 | BLASTN svg | BLASTP svg |
NC_005126:589000 | 589000 | 618530 | 29531 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 4e-49 | 204 | BLASTN svg | BLASTP svg |
NC_005126:4210500 | 4210500 | 4246783 | 36284 | Photorhabdus luminescens subsp. laumondii TTO1, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015566:4662171 | 4662171 | 4687413 | 25243 | Serratia sp. AS12 chromosome, complete genome | 4e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_003143:645559 | 645559 | 667987 | 22429 | Yersinia pestis CO92, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_004088:3955933 | 3955933 | 3980025 | 24093 | Yersinia pestis KIM, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_005810:3238391 | 3238391 | 3260819 | 22429 | Yersinia pestis biovar Microtus str. 91001, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_006155:4105542 | 4105542 | 4127368 | 21827 | Yersinia pseudotuberculosis IP 32953, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_008150:3529430 | 3529430 | 3552926 | 23497 | Yersinia pestis Antiqua, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010159:1101241 | 1101241 | 1125720 | 24480 | Yersinia pestis Angola, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010634:4045794 | 4045794 | 4067620 | 21827 | Yersinia pseudotuberculosis PB1/+, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_012779:2928000* | 2928000 | 2954287 | 26288 | Edwardsiella ictaluri 93-146, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010694:2189652* | 2189652 | 2219188 | 29537 | Erwinia tasmaniensis, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_013508:876431* | 876431 | 915513 | 39083 | Edwardsiella tarda EIB202, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015663:1869000 | 1869000 | 1912195 | 43196 | Enterobacter aerogenes KCTC 2190 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_003919:2091547 | 2091547 | 2120599 | 29053 | Xanthomonas axonopodis pv. citri str. 306, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |