Query: NC_012808:1920500 Methylobacterium extorquens AM1, complete genome
Start: 1920500, End: 1941268, Length: 20769
Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_012808:1979000 | 1979000 | 1997405 | 18406 | Methylobacterium extorquens AM1, complete genome | 8e-139 | 502 | BLASTN svg | BLASTP svg |
NC_009049:1125681 | 1125681 | 1161365 | 35685 | Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence | 3e-46 | 194 | BLASTN svg | BLASTP svg |
NC_014623:5029932 | 5029932 | 5084460 | 54529 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_009439:2427120* | 2427120 | 2481163 | 54044 | Pseudomonas mendocina ymp, complete genome | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_011901:2202690* | 2202690 | 2232302 | 29613 | Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_008340:1075500 | 1075500 | 1099776 | 24277 | Alkalilimnicola ehrlichei MLHE-1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_011004:1136895* | 1136895 | 1161877 | 24983 | Rhodopseudomonas palustris TIE-1, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_009434:3611738* | 3611738 | 3748875 | 137138 | Pseudomonas stutzeri A1501, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_015733:5955467* | 5955467 | 5987999 | 32533 | Pseudomonas putida S16 chromosome, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_010501:5735656* | 5735656 | 5773339 | 37684 | Pseudomonas putida W619, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_002678:5060670 | 5060670 | 5112833 | 52164 | Mesorhizobium loti MAFF303099, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014215:1190447* | 1190447 | 1214099 | 23653 | Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, | 1e-05 | 60 | BLASTN svg | BLASTP svg |
NC_002935:48687* | 48687 | 69828 | 21142 | Corynebacterium diphtheriae NCTC 13129, complete genome | 1e-05 | 60 | BLASTN svg | BLASTP svg |