Pre_GI: BLASTN Hits

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Query: NC_012808:1920500 Methylobacterium extorquens AM1, complete genome

Start: 1920500, End: 1941268, Length: 20769

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008340:10755001075500109977624277Alkalilimnicola ehrlichei MLHE-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002935:48687*486876982821142Corynebacterium diphtheriae NCTC 13129, complete genome1e-0560BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012808:19790001979000199740518406Methylobacterium extorquens AM1, complete genome8e-139502BLASTN svgBLASTP svg
NC_014215:1190447*1190447121409923653Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-0560BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_009049:11256811125681116136535685Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence3e-46194BLASTN svgBLASTP svg
NC_011004:1136895*1136895116187724983Rhodopseudomonas palustris TIE-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014623:50299325029932508446054529Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_011901:2202690*2202690223230229613Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-1281.8BLASTN svgBLASTP svg