Query: NC_011660:2924397 Listeria monocytogenes HCC23 chromosome, complete genome
Start: 2924397, End: 2947015, Length: 22619
Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria
General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_003212:57061* | 57061 | 101087 | 44027 | Listeria innocua Clip11262, complete genome | 0 | 6052 | BLASTN svg | BLASTP svg |
NC_003210:2380419 | 2380419 | 2398599 | 18181 | Listeria monocytogenes EGD-e, complete genome | 0 | 4805 | BLASTN svg | BLASTP svg |
NC_003212:2413824* | 2413824 | 2444468 | 30645 | Listeria innocua Clip11262, complete genome | 0 | 3616 | BLASTN svg | BLASTP svg |
NC_008555:1204000 | 1204000 | 1242194 | 38195 | Listeria welshimeri serovar 6b str. SLCC5334, complete genome | 2e-115 | 424 | BLASTN svg | BLASTP svg |
NC_003212:1713958 | 1713958 | 1749396 | 35439 | Listeria innocua Clip11262, complete genome | 1e-51 | 212 | BLASTN svg | BLASTP svg |
NC_003212:1248000 | 1248000 | 1266205 | 18206 | Listeria innocua Clip11262, complete genome | 1e-51 | 212 | BLASTN svg | BLASTP svg |
NC_010382:3643288 | 3643288 | 3667178 | 23891 | Lysinibacillus sphaericus C3-41, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_004116:1276791 | 1276791 | 1310099 | 33309 | Streptococcus agalactiae 2603V/R, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_003212:2592600 | 2592600 | 2612442 | 19843 | Listeria innocua Clip11262, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_014335:5165211* | 5165211 | 5184300 | 19090 | Bacillus cereus biovar anthracis str. CI chromosome, complete | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_012472:5239944* | 5239944 | 5258217 | 18274 | Bacillus cereus 03BB102, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_006274:5267585* | 5267585 | 5293318 | 25734 | Bacillus cereus E33L, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_005957:5203915* | 5203915 | 5225099 | 21185 | Bacillus thuringiensis serovar konkukian str. 97-27, complete | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007530:5197854* | 5197854 | 5219822 | 21969 | Bacillus anthracis str. 'Ames Ancestor', complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_005945:5202176* | 5202176 | 5224865 | 22690 | Bacillus anthracis str. Sterne, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_004722:5381208* | 5381208 | 5409299 | 28092 | Bacillus cereus ATCC 14579, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_003997:5200805* | 5200805 | 5223494 | 22690 | Bacillus anthracis str. Ames, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |