Pre_GI: BLASTN Hits

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Query: NC_011660:2924397 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 2924397, End: 2947015, Length: 22619

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome06052BLASTN svgBLASTP svg
NC_003210:23804192380419239859918181Listeria monocytogenes EGD-e, complete genome04805BLASTN svgBLASTP svg
NC_003212:2413824*2413824244446830645Listeria innocua Clip11262, complete genome03616BLASTN svgBLASTP svg
NC_008555:12040001204000124219438195Listeria welshimeri serovar 6b str. SLCC5334, complete genome2e-115424BLASTN svgBLASTP svg
NC_003212:17139581713958174939635439Listeria innocua Clip11262, complete genome1e-51212BLASTN svgBLASTP svg
NC_003212:12480001248000126620518206Listeria innocua Clip11262, complete genome1e-51212BLASTN svgBLASTP svg
NC_010382:36432883643288366717823891Lysinibacillus sphaericus C3-41, complete genome1e-29139BLASTN svgBLASTP svg
NC_004116:12767911276791131009933309Streptococcus agalactiae 2603V/R, complete genome2e-19105BLASTN svgBLASTP svg
NC_003212:25926002592600261244219843Listeria innocua Clip11262, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014335:5165211*5165211518430019090Bacillus cereus biovar anthracis str. CI chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_012472:5239944*5239944525821718274Bacillus cereus 03BB102, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006274:5267585*5267585529331825734Bacillus cereus E33L, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005957:5203915*5203915522509921185Bacillus thuringiensis serovar konkukian str. 97-27, complete2e-1075.8BLASTN svgBLASTP svg
NC_007530:5197854*5197854521982221969Bacillus anthracis str. 'Ames Ancestor', complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005945:5202176*5202176522486522690Bacillus anthracis str. Sterne, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004722:5381208*5381208540929928092Bacillus cereus ATCC 14579, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003997:5200805*5200805522349422690Bacillus anthracis str. Ames, complete genome4e-0867.9BLASTN svgBLASTP svg