Pre_GI: BLASTN Hits

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Query: NC_011244:319373 Borrelia recurrentis A1, complete genome

Start: 319373, End: 339142, Length: 19770

Host Lineage: Borrelia recurrentis; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia recurrentis isolated from adult patient with louse-borne relapsing fever in Ethiopia. Borrelia recurrentis is the causative agent of louse-borne relapsing fever. Prior to World War II, this organism was responsible for large disease outbreaks with a mortality of up to 40% in much of the world. Currently this disease is limited to parts of Africa, China, and Peru. B. recurrentis is transmitted when infected human body lice (Pediculus humanus) are crushed and their fluids contaminate mucous membranes or breaks in the skin. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010673:29167929167931681725139Borrelia hermsii DAH, complete genome04046BLASTN svgBLASTP svg
NC_008710:27720727720731812040914Borrelia turicatae 91E135, complete genome04022BLASTN svgBLASTP svg
NC_006369:28887012888701290683418134Legionella pneumophila str. Lens, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_006368:30282863028286305492626641Legionella pneumophila str. Paris, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002942:29432062943206296445521250Legionella pneumophila subsp. pneumophila str. Philadelphia 1,2e-1385.7BLASTN svgBLASTP svg
NC_015722:4539*45393359929061Candidatus Midichloria mitochondrii IricVA chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_015276:27690002769000279436025361Marinomonas mediterranea MMB-1 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_015638:591964*59196461155819595Lacinutrix sp. 5H-3-7-4 chromosome, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_012846:15510001551000157244221443Bartonella grahamii as4aup, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007940:1138324*1138324116323224909Rickettsia bellii RML369-C, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014330:2268773*2268773229259923827Brachyspira pilosicoli 95/1000 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010718:1454087*1454087147302118935Natranaerobius thermophilus JW/NM-WN-LF, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_003454:21134642113464214145027987Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete6e-0763.9BLASTN svgBLASTP svg
NC_018607:1803500*1803500182666923170Brachyspira pilosicoli B2904 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_014150:446359*44635946998023622Brachyspira murdochii DSM 12563 chromosome, complete genome9e-0660BLASTN svgBLASTP svg