Query: NC_011244:319373 Borrelia recurrentis A1, complete genome
Start: 319373, End: 339142, Length: 19770
Host Lineage: Borrelia recurrentis; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria
General Information: Borrelia recurrentis isolated from adult patient with louse-borne relapsing fever in Ethiopia. Borrelia recurrentis is the causative agent of louse-borne relapsing fever. Prior to World War II, this organism was responsible for large disease outbreaks with a mortality of up to 40% in much of the world. Currently this disease is limited to parts of Africa, China, and Peru. B. recurrentis is transmitted when infected human body lice (Pediculus humanus) are crushed and their fluids contaminate mucous membranes or breaks in the skin. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010673:291679 | 291679 | 316817 | 25139 | Borrelia hermsii DAH, complete genome | 0 | 4046 | BLASTN svg | BLASTP svg |
NC_008710:277207 | 277207 | 318120 | 40914 | Borrelia turicatae 91E135, complete genome | 0 | 4022 | BLASTN svg | BLASTP svg |
NC_006369:2888701 | 2888701 | 2906834 | 18134 | Legionella pneumophila str. Lens, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_006368:3028286 | 3028286 | 3054926 | 26641 | Legionella pneumophila str. Paris, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_002942:2943206 | 2943206 | 2964455 | 21250 | Legionella pneumophila subsp. pneumophila str. Philadelphia 1, | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015722:4539* | 4539 | 33599 | 29061 | Candidatus Midichloria mitochondrii IricVA chromosome, complete | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015276:2769000 | 2769000 | 2794360 | 25361 | Marinomonas mediterranea MMB-1 chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_015638:591964* | 591964 | 611558 | 19595 | Lacinutrix sp. 5H-3-7-4 chromosome, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012846:1551000 | 1551000 | 1572442 | 21443 | Bartonella grahamii as4aup, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007940:1138324* | 1138324 | 1163232 | 24909 | Rickettsia bellii RML369-C, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_014330:2268773* | 2268773 | 2292599 | 23827 | Brachyspira pilosicoli 95/1000 chromosome, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010718:1454087* | 1454087 | 1473021 | 18935 | Natranaerobius thermophilus JW/NM-WN-LF, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_003454:2113464 | 2113464 | 2141450 | 27987 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_018607:1803500* | 1803500 | 1826669 | 23170 | Brachyspira pilosicoli B2904 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
NC_014150:446359* | 446359 | 469980 | 23622 | Brachyspira murdochii DSM 12563 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |