Pre_GI: BLASTN Hits

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Query: NC_010998:111052 Rhizobium etli CIAT 652 plasmid pA, complete sequence

Start: 111052, End: 135230, Length: 24179

Host Lineage: Rhizobium etli; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Rhizobium etli belongs to the Rhizobiacea family of the alpha proteobacteria subdivision. It is a nitrogen-fixing symbiotic bacteria that interacts with the root of the common bean plant Phaseolus vulgaris. The molecular biology and evolution of R. etli and its relation to other nitrogen/fixing symbionts has been well studied. The genomic sequence will provide information on the process of symbiosis, on the genetic systems that allow the survival and adaptations of this bacteria to the soil, and on the evolutionary relationship and the symbiosis origin of this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007761:10975311097531112469427164Rhizobium etli CFN 42, complete genome02478BLASTN svgBLASTP svg
NC_003037:12456451245645126907723433Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence2e-170607BLASTN svgBLASTP svg
NC_010505:33763223376322340791331592Methylobacterium radiotolerans JCM 2831, complete genome4e-30141BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome9e-25123BLASTN svgBLASTP svg
NC_007643:2722265*2722265275282330559Rhodospirillum rubrum ATCC 11170, complete genome3e-21111BLASTN svgBLASTP svg
NC_003047:3202125*3202125322912727003Sinorhizobium meliloti 1021, complete genome1e-20109BLASTN svgBLASTP svg
NC_013093:832971*83297185669123721Actinosynnema mirum DSM 43827, complete genome2e-19105BLASTN svgBLASTP svg
NC_015588:24682072468207249482226616Isoptericola variabilis 225 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_014217:80040680040682559925194Starkeya novella DSM 506 chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003155:3913789*3913789393748923701Streptomyces avermitilis MA-4680, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008278:30258993025899304559919701Frankia alni ACN14a, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020211:1655826*1655826167870522880Serratia marcescens WW4, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013169:12900001290000131283622837Kytococcus sedentarius DSM 20547, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003888:55505825550582557168721106Streptomyces coelicolor A3(2), complete genome5e-1487.7BLASTN svgBLASTP svg
NC_018750:51144345114434513594121508Streptomyces venezuelae ATCC 10712, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013172:95377295377297644022669Brachybacterium faecium DSM 4810, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014761:74311374311376488521773Oceanithermus profundus DSM 14977 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_015061:2867027*2867027288717520149Rahnella sp. Y9602 chromosome, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,3e-1281.8BLASTN svgBLASTP svg
NC_021177:54196205419620544465625037Streptomyces fulvissimus DSM 40593, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010067:660659*66065968851527857Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-1179.8BLASTN svgBLASTP svg
NC_008786:14279714279716109918303Verminephrobacter eiseniae EF01-2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013093:73773773773776222824492Actinosynnema mirum DSM 43827, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008148:30248673024867304671521849Rubrobacter xylanophilus DSM 9941, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007908:10101621010162103411423953Rhodoferax ferrireducens T118, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015379:35706583570658359449623839Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,7e-1073.8BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010067:32471693247169327263025462Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete7e-1073.8BLASTN svgBLASTP svg
NC_010508:18985471898547192485126305Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_015953:47934844793484481122917746Streptomyces sp. SirexAA-E chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013947:44133824413382443709923718Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002678:60614486061448608566524218Mesorhizobium loti MAFF303099, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003305:1297785*1297785132171123927Agrobacterium tumefaciens str. C58 chromosome linear, complete5e-0867.9BLASTN svgBLASTP svg
NC_008702:25205002520500255173231233Azoarcus sp. BH72, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013421:4790696*4790696482022829533Pectobacterium wasabiae WPP163, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007712:15165891516589154609929511Sodalis glossinidius str. 'morsitans', complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009778:14778411477841150009922259Enterobacter sakazakii ATCC BAA-894, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010572:28435892843589286504421456Streptomyces griseus subsp. griseus NBRC 13350, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014831:21330602133060217362540566Thermaerobacter marianensis DSM 12885 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020260:1535394*1535394155809922706Cronobacter sakazakii Sp291, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015675:2567000*2567000258988822889Mesorhizobium opportunistum WSM2075 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008781:1507384*1507384153416926786Polaromonas naphthalenivorans CJ2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008700:1627401*1627401165612228722Shewanella amazonensis SB2B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008463:1912348*1912348195418241835Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002932:22166122166124321221552Chlorobium tepidum TLS, complete genome3e-0661.9BLASTN svgBLASTP svg