Pre_GI: BLASTN Hits

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Query: NC_010816:1274702 Bifidobacterium longum DJO10A, complete genome

Start: 1274702, End: 1298736, Length: 24035

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This organism is found in adult humans and formula fed infants as a normal component of gut flora. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012815:1465670*1465670148782122152Bifidobacterium animalis subsp. lactis DSM 10140, complete genome6e-32147BLASTN svgBLASTP svg
NC_012814:1465738*1465738148788922152Bifidobacterium animalis subsp. lactis Bl-04, complete genome6e-32147BLASTN svgBLASTP svg
NC_018720:417500*41750043759920100Bifidobacterium asteroides PRL2011 chromosome, complete genome9e-28133BLASTN svgBLASTP svg
NC_015067:32500325005709924600Bifidobacterium longum subsp. longum JCM 1217, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013858:416000*41600045309937100Azospirillum sp. B510 plasmid pAB510d, complete sequence5e-1177.8BLASTN svgBLASTP svg
NC_010688:2400471*2400471242735326883Xanthomonas campestris pv. campestris, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007086:2408837*2408837243103522199Xanthomonas campestris pv. campestris str. 8004, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003919:2435058*2435058245860723550Xanthomonas axonopodis pv. citri str. 306, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003902:2469500*2469500250580636307Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0971.9BLASTN svgBLASTP svg
NC_011757:577611*57761160454026930Methylobacterium chloromethanicum CM4, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011884:10293281029328105377624449Cyanothece sp. PCC 7425, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013729:3573000*3573000359711224113Kribbella flavida DSM 17836, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013946:2854219*2854219287538821170Meiothermus ruber DSM 1279 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013946:879199*87919990227423076Meiothermus ruber DSM 1279 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014153:2282725*2282725230725524531Thiomonas intermedia K12 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014376:2964731*2964731300604241312Clostridium saccharolyticum WM1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008209:25366325366327713323471Roseobacter denitrificans OCh 114, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014212:319815*31981533968619872Meiothermus silvanus DSM 9946 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014212:3206860*3206860322629919440Meiothermus silvanus DSM 9946 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014500:26880952688095271328625192Dickeya dadantii 3937 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015387:2042042*2042042206360521564Marinithermus hydrothermalis DSM 14884 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007907:52974775297477532099523519Desulfitobacterium hafniense Y51, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008702:1432952*1432952147997747026Azoarcus sp. BH72, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010508:1206498*1206498122498518488Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014121:32359113235911326030624396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_015376:96500096500098517820179Burkholderia gladioli BSR3 chromosome chromosome 2, complete2e-0765.9BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020064:1854589*1854589187841223824Serratia marcescens FGI94, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020125:288706*28870631234423639Riemerella anatipestifer RA-CH-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009439:47342374734237475635022114Pseudomonas mendocina ymp, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007951:3655088*3655088368859933512Burkholderia xenovorans LB400 chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome7e-0763.9BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010170:1324758*1324758137344648689Bordetella petrii, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010170:1580832*1580832159859917768Bordetella petrii, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011146:1998981*1998981205724258262Geobacter bemidjiensis Bem, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011894:792827928211536336082Methylobacterium nodulans ORS 2060, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013855:89265789265791607423418Azospirillum sp. B510 plasmid pAB510a, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_015185:1414453*1414453144663332181Desulfurobacterium thermolithotrophum DSM 11699 chromosome,7e-0763.9BLASTN svgBLASTP svg
NC_007948:4558000*4558000461212254123Polaromonas sp. JS666, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008782:1277117*1277117129923122115Acidovorax sp. JS42, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009142:5647737*5647737567459926863Saccharopolyspora erythraea NRRL 2338, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013174:1459730*1459730148266422935Jonesia denitrificans DSM 20603, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015422:1643000*1643000166547622477Alicycliphilus denitrificans K601 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete3e-0661.9BLASTN svgBLASTP svg