Pre_GI: BLASTN Hits

Some Help

Query: NC_010612:957786 Mycobacterium marinum M, complete genome

Start: 957786, End: 981862, Length: 24077

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:90200090200092552523526Mycobacterium liflandii 128FXT, complete genome019780BLASTN svgBLASTP svg
NC_020133:2144752*2144752217059925848Mycobacterium liflandii 128FXT, complete genome0668BLASTN svgBLASTP svg
NC_010612:22157242215724224185126128Mycobacterium marinum M, complete genome3e-160573BLASTN svgBLASTP svg
NC_015848:16475231647523167029122769Mycobacterium canettii CIPT 140010059, complete genome2e-28135BLASTN svgBLASTP svg
NC_009565:16297801629780165615326374Mycobacterium tuberculosis F11, complete genome2e-28135BLASTN svgBLASTP svg
NC_002945:16217651621765164826226498Mycobacterium bovis AF2122/97, complete genome3e-18101BLASTN svgBLASTP svg
NC_004369:43759443759445872021127Corynebacterium efficiens YS-314, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010612:63855206385520640834522826Mycobacterium marinum M, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_020133:59655005965500598723221733Mycobacterium liflandii 128FXT, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003888:46130004613000463146518466Streptomyces coelicolor A3(2), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003155:49066394906639493178025142Streptomyces avermitilis MA-4680, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020133:57106615710661573224421584Mycobacterium liflandii 128FXT, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011832:61987461987464334523472Candidatus Methanosphaerula palustris E1-9c, complete genome3e-0661.9BLASTN svgBLASTP svg