Pre_GI: BLASTN Hits

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Query: NC_010610:861194 Lactobacillus fermentum IFO 3956, complete genome

Start: 861194, End: 883923, Length: 22730

Host Lineage: Lactobacillus fermentum; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This probiotic species has been associated with active caries lesions.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010610:20136592013659205177738119Lactobacillus fermentum IFO 3956, complete genome03053BLASTN svgBLASTP svg
NC_010610:90845290845293309924648Lactobacillus fermentum IFO 3956, complete genome02995BLASTN svgBLASTP svg
NC_010610:16495001649500167265923160Lactobacillus fermentum IFO 3956, complete genome02518BLASTN svgBLASTP svg
NC_010610:1580483*1580483162924448762Lactobacillus fermentum IFO 3956, complete genome02512BLASTN svgBLASTP svg
NC_010610:1385066*1385066141573130666Lactobacillus fermentum IFO 3956, complete genome02504BLASTN svgBLASTP svg
NC_010610:17650001765000179344828449Lactobacillus fermentum IFO 3956, complete genome02502BLASTN svgBLASTP svg
NC_010610:79597579597582885432880Lactobacillus fermentum IFO 3956, complete genome02498BLASTN svgBLASTP svg
NC_008525:56100056100058709926100Pediococcus pentosaceus ATCC 25745, complete genome01848BLASTN svgBLASTP svg
NC_010610:269380*26938029559926220Lactobacillus fermentum IFO 3956, complete genome0743BLASTN svgBLASTP svg
NC_014106:24483124483126509920269Lactobacillus crispatus ST1, complete genome0686BLASTN svgBLASTP svg
NC_010610:755000*75500078559930600Lactobacillus fermentum IFO 3956, complete genome2e-75291BLASTN svgBLASTP svg
NC_010999:62348962348964609722609Lactobacillus casei, complete genome4e-70274BLASTN svgBLASTP svg
NC_010610:10750010750013485227353Lactobacillus fermentum IFO 3956, complete genome1e-69272BLASTN svgBLASTP svg
NC_010610:11784301178430122897750548Lactobacillus fermentum IFO 3956, complete genome2e-37165BLASTN svgBLASTP svg
NC_008497:32160321605098118822Lactobacillus brevis ATCC 367, complete genome2e-28135BLASTN svgBLASTP svg
NC_008526:34344534344536727223828Lactobacillus casei ATCC 334, complete genome5e-23117BLASTN svgBLASTP svg
NC_014972:23716472371647239964127995Desulfobulbus propionicus DSM 2032 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015697:256000*25600027836622367Lactobacillus reuteri SD2112 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009648:38036223803622385072747106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0765.9BLASTN svgBLASTP svg